Table 1 Model performance based on 10-fold cross-validation.

From: Predicting genes associated with RNA methylation pathways using machine learning

 

Accuracy

Precision

Recall

F1

AUC

Full feature set

GB

0.875  ± 0.025

0.895  ± 0.033

0.865  ± 0.031

0.872 ± 0.025

0.938 ± 0.015

GNB

0.851 ± 0.025

0.821 ± 0.032

0.924 ± 0.021

0.863 ± 0.021

0.862 ± 0.023

LR

0.859 ± 0.021

0.870 ± 0.025

0.859 ± 0.023

0.857 ± 0.021

0.921 ± 0.015

RF

0.870 ± 0.021

0.870 ± 0.026

0.886 ± 0.032

0.871 ± 0.022

0.937 ± 0.014

SVM

0.856 ± 0.022

0.876 ± 0.028

0.845 ± 0.027

0.852 ± 0.023

0.921 ± 0.017

Reduced feature set

GB

0.799 ± 0.029

0.800 ± 0.035

0.819 ± 0.032

0.801 ± 0.029

0.860 ± 0.031

GNB

0.781 ± 0.022

0.765 ± 0.028

0.840 ± 0.043

0.792 ± 0.024

0.800 ± 0.021

LR

0.795 ± 0.030

0.797 ± 0.035

0.814 ± 0.030

0.797 ± 0.029

0.857 ± 0.032

RF

0.805 ± 0.024

0.802 ± 0.033

0.833 ± 0.023

0.809 ± 0.022

0.867 ± 0.025

SVM

0.812 ± 0.027

0.822 ± 0.036

0.816 ± 0.032

0.811 ± 0.027

0.864 ± 0.026

  1. LR Logistic Regression, GNB Gaussian Naïve Bayes, SVM Support Vector Machine, RF Random Forest, GB Gradient Boosting.