Table 1 Summary of candidate genes that may have a role in the high-altitude adaptation of TC.

From: Analysis of genome and methylation changes in Chinese indigenous chickens over time provides insight into species conservation

Symbol

FST value

GO_Term

Biological category

Con-TC/Con-BC

Con-TC/Con-WC

FAR2

0.46

0.42

GO:0055114

Oxidation-reduction process

NDUFA9

0.62

0.43

GO:0055114

Oxidation-reduction process

FRRS1

0.70

0.57

GO:0055114

Oxidation-reduction process

RDH8

0.40

0.35

GO:0055114

Oxidation-reduction process

BCO2

0.44

0.51

GO:0055114

Oxidation-reduction process

AKAP11

0.36

0.32

GO:0005777

Peroxisome

EGFL6

0.38

0.28

GO:0005509

Calcium ion binding

NELL1

0.37

0.31

GO:0005509

Calcium ion binding

TNFSF11

0.36

0.32

GO:0055074

Calcium ion homeostasis

DENND5B

0.37

0.30

GO:0005262

Calcium channel activity

PLCZ1

0.51

0.44

GO:0006816

Calcium ion transport

MYLK

0.37

0.29

GO:0051928

Positive regulation of calcium ion transport

WTIP

0.51

0.40

GO:0001666

Response to hypoxia

SDHD

0.44

0.51

GO:0071456

Cellular response to hypoxia