Fig. 2: Comparisons of peptide-lipid interactions. | Communications Biology

Fig. 2: Comparisons of peptide-lipid interactions.

From: Matching amino acids membrane preference profile to improve activity of antimicrobial peptides

Fig. 2

a Isothermal titration calorimetry measurements of peptide interactions with DMPC:DMPG liposomes. ΔH indicates the enthalpy change. ΔS indicates the entropy change. The binding constant (or the association constant K, M–1) is the inverse of the dissociation constant (Kd). The larger binding constants of LWCopW29 and WCopW29 indicate these peptides have high affinity for the artificial bacterial membrane liposomes. An independent experiment yielded the same results (Supplementary Fig. 5). b Addition of DMPC:DMPG liposomes changed the tryptophan fluorescence intensity of the peptides. In the graphs, the 340 nm maxima intensity values were normalized to the initial fluorescence value to allow comparisons of fluorescence intensities. A quencher (water or acrylamide) decreased the fluorescence intensity, while environmental hydrophobicity (lipid) increased the fluorescence intensity. Lipid concentrations are as follows: light blue, 10 μM; blue, 50 μM; dark blue, 100 μM; black, 1000 μM. The red dotted line indicates 10 μM acrylamide; the pink dotted line, 100 μM acrylamide. A high lipid concentration (1000 μM) quenched HLWCopW29-2 and HLWCopW29-4 fluorescence. This effect was comparable to that of acrylamide, indicting larger exposure of tryptophan to water. Independent experiments yielded the same results (Supplementary Fig. 6). c Proton-leakage increases DiSC3(5) fluorescence in S. aureus. Peptides were added at 120 s. The fluorescence intensities of the four analogs were similar at the HLWCopW29-2 and HLWCopW29-4 MIC against OD 0.1 S. aureus (10 μM peptide each). The fluorescence intensities of LWCopW29 and WCopW29 were higher at the LWCopW29 and WCopW29 MICs (2 μM and 1 μM, respectively) (Supplementary Table 2). An independent experiment yielded the same results (Supplementary Fig. 7).

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