Fig. 6: KYP-targeted genomic regions are highly correlated with AS1 and HDA6. | Communications Biology

Fig. 6: KYP-targeted genomic regions are highly correlated with AS1 and HDA6.

From: Arabidopsis histone H3 lysine 9 methyltransferases KYP/SUVH5/6 are involved in leaf development by interacting with AS1-AS2 to repress KNAT1 and KNAT2

Fig. 6

a X–Y scatter plots showing the relative enrichment of H3K9me2 (kyp: WT) and the binding level of KYP. The value of H3K9me2/H3 indicated the relative H3K9me2 level of kyp compared to WT and normalized to H3. The dotted line indicated the average value. b, c Heat map representation of the co-occupancy of KYP with AS1 (b) and HDA6 (c) in the genome. Each horizontal line represents an AS1-(b) or KYP-(c) bound region, and the signal intensity is shown for KYP (b) or HDA6 (c) binding. Columns show the genomic region surrounding each AS1-(b) or KYP-(c) peak. Signal intensity is indicated by the shade of red. d X–Y scatter plots showing the relative enrichment of the H3Ac level (hda6: WT) and the binding level of KYP. The value of H3Ac indicated the relative H3Ac level of kyp compared to WT. The dotted line indicated the average value. e DNA binding motifs significantly enriched in the KYP or AS1-binding sites. f GO-BP annotation of KYP -targeted genes. Annotation terms with p-value < 0.025 were listed.

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