Fig. 4: Transferring human kidney atlas for integration of single-cell human kidney across conditions.
From: MASI enables fast model-free standardization and integration of single-cell transcriptomics data
a Comparison of label transferring for MASI, supervised, and semi-supervised methods. ARI and NMI are calculated by comparing method-reported annotation with author-reported annotation in a study-wise manner. b Visualization of the integrative annotation by MASI. Cells are colored according to MASI-reported cell-type annotation. c Visualization of integration by MASI. Cells are colored according to the study id. d and e Population densities in DKD and control samples. Cell type annotation is shown on the left panel. Cell-type population densities of DKD and control samples are presented separately to highlight differences in cell-type populations. f Quantitative measurement of cellular compositions. CD4+ T cell, NK cell, and B cell are zoomed in to show the difference between control and DKD groups.
