Table 2 Catalytic activity, dimer dissociation and GC373 binding constants of mature MPro and its precursor analogues.

From: Insights into the mechanism of SARS-CoV-2 main protease autocatalytic maturation from model precursors

Construct

kcat/Km (µM−1 min−1)

kcat/KmKdimer a (µM−2 min−1)

Kdimer (µM)

GC373 binding (Kd, µM)

Catalytic/Binding species

Wild-type

 MProWT b

0.6 ± 0.05

 

1.3 ± 0.2

0.15 ± 03 c

Dimer

Substitution mutants

 MProR298A

0.31 ± 0.01 d

0.0435 ± 0.002

7.13 ± 0.40

0.2 ± 0.04 c

Dimer

 MProE290A

(2.82 ± 0.04) 10−3 d

(8.0 ± 0.40) 10−6

353 ± 21

3.5 ± 0.5 c

4.8 ± 0.6 e

Dimer

 MProM b

(3.4 ± 0.13) 10−3

(5.0 ± 0.15) 10−7

6600

6.13 ± 0.3 c

6.7 ± 0.2 e

Dimer

Deletion mutant

 MPro1–199 b

(1.15 ± 0.03) 10−6

  

32 ± 5 c

Monomer

Precursor analogues

 −102MProM

   

19.2 ± 4.4 c

Monomer

 MProM-IP

(6.04 ± 0.15) 10−6

   

Monomer

(9.40 ± 0.90) 10−4 d

  

6.02 ± 1.2 c

8.5 ± 1.5 e

Dimer

  1. akcat/KmKdimer is the slope of the linear plot of the rate vs the square of the protein concentration.
  2. bcited from references 11,13.
  3. cdetermined by ITC.
  4. dkcat/Km was determined in the presence of the equimolar amount of enzyme and GC373 as described for MProM in Nashed et al.13.
  5. edetermined by SV-AUC.