Fig. 5: Results of protein complex prediction. | Communications Biology

Fig. 5: Results of protein complex prediction.

From: Multi-domain and complex protein structure prediction using inter-domain interactions from deep learning

Fig. 5: Results of protein complex prediction.

a The number of models by DeepAssembly, AlphaFold-linker and RoseTTAFold within each DockQ score threshold. b Example of a heterodimer of viral RNA polymerase (PDB ID: 4Q7J) predicted by DeepAssembly and AlphaFold-Multimer. Experimentally determined structure is colored in gray, and the predicted model is colored by chain. Below are PAE heat maps showing the predicted error. c Fraction of proteins with DockQ score higher than each cutoff for different paired MSA depths. d Fraction of proteins with DockQ score higher than each cutoff for different kingdoms.

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