Table 1 Seventeen remote sensing and 6 field-based variables considered as potential predictive drivers of coral bleaching divided by (a) selected metrics and (b) metrics not selected in the final gradient-boosted model
From: Underlying drivers of coral reef vulnerability to bleaching in the Mesoamerican Reef
Variable | Description | Range of values (units) | Notes |
|---|---|---|---|
(a) Metrics selected in the final gradient-boosted model | |||
Depth | The mean depth of the reef in meters. | 1.00–26.45 (m) | The sixth most relevant variable in the model. BSI was higher at greater depths. |
Diversity | The diversity of corals calculated from Hill’s number one is equal to Shannon’s diversity exponent, this represents true diversity without considering the less abundant or “rare” species84. | 2.173–21.212 (effective species) | The seventh most relevant variable in the model. BSI was higher at greater diversity. |
HS28days | The sum of HS in 28 days before the sampling date. | 0.0–48.55 (°C) | The second most relevant variable in the model. BSI was higher in reefs with higher heat stress in the last 28 days. |
SIreef | Reef sensitivity is based on the relative abundance of species weighted by species response to bleaching3,23. | 0.1438–0.3665 (index value) | The third most relevant variable in the model. A sharp increase in the BSI as the sensitivity index increases. |
ROTCclim | The climatological seasonal-warming rate (ROTCclim) is the average of the annual ROTC values for the period 1985–2012 (sensu Chollett et al. 2014)9. The seasonal warming rate (ROTC) reflects the trend in temperature change over 84 weeks during summer9. | 0.1931–0.2464 (°C by week) | The most relevant variable in the model. Negative relationship with BSI. Reefs with a higher rate of climatological seasonal warming rate exhibited less bleaching. |
Trend of DHW | DHW quantifies heat stress by summing up positive daily anomalies above 1 °C above the MMM over 84 days (12 weeks), divided by 7 to express values per week38. ‘Trend of DHW’ is the trend of annual maximums DHWs from 1985 to the sampling year, a trend obtained from a generalized least square model42. | 0.00000–0.30064 (°C-weeks by year) | The fifth most relevant variable was selected in the model. Higher BSI in reefs with a higher rate of increase in DHWs. |
∆ DHW | Difference between the maximum observed value of DHW in the current event up to the sampling date and the maximum observed value of DHW in the last year (building on Hughes 201919) | −3.7787 to 7.7007 (°C-weeks) | The fourth most relevant variable was selected in the model. Higher BSI in reefs with higher recent heat stress (∆DHW ≥ 6). |
(b) Metrics not selected in the final gradient-boosted model | |||
DCA1 | The first axis in a multidimensional ordination analysis based on species composition and applying a Detrended Correspondence Analysis85. Considered a potential ecological gradient related to bleaching3. | −1.6264 to 2.2710 (axis position) | Not selected in the final model but high correlation with diversity. |
DHW28days | DHW calculation considering a 28-day window16. | 0.0000−6.9358 (°C-weeks) | Not selected in the final model but high collinearity with different heat stress metrics. |
DHW | Conventional DHW calculation considering an 84-day window38. | 0.5141–13.7115 (°C-weeks) | Not selected in the final model but high collinearity with different heat stress metrics. |
DHW555days | DHW calculation considering a 555-day window represents the accumulated stress since the beginning of the summer of the previous year. | 1.217–32.874 (°C-weeks) | Not selected in the final model but high collinearity with different heat stress metrics. |
HS3days | Hotspots (HS) represent positive daily anomalies above the MMM38. HS3days is the average HS in the last three days before the sampling date. | 0.00000–1.49589 (°C) | Not selected in the final model but high collinearity with different heat stress metrics. |
HS128days | Number of days with HS values greater than 1 °C in the last 28 days16. | 0–28 (days) | Not selected in the final model but high collinearity with different heat stress metrics. |
HS184days | Number of days with HS values greater than 1 °C in the last 84 days16. | 3–60 (days) | Not selected in the final model but high collinearity with different heat stress metrics. |
HS228days | Number of days with HS values greater than 2 °C in the last 28 days16. | 0–4 (days) | Not selected in the final model but high collinearity with different heat stress metrics. |
HS284days | Number of days with HS values greater than 2 °C in the last 84 days16 | 0–4 (days) | Not selected in the final model but high collinearity with different heat stress metrics. |
HS84days | The sum of HS in 84 days before the sampling date. | 19.94–108.30 (°C) | Not selected in the final model but high collinearity with different heat stress metrics. |
HS555days | The sum of HS in 555 days before the sampling date. | 90.13–332.12 (°C) | Not selected in the final model but high collinearity with different heat stress metrics. |
MMM | Monthly average of the hottest month registered during 1985-201238 | 28.62–29.06 (°C) | Not selected in the final model but high correlation with some thermal metrics. |
RFI | Reef Functional Index based on the relative abundance of species multiplied by a functional coefficient71 | 0.1800–0.7679 (index value) | Not selected in the final model. |
Richness | Number of coral species. | 5–34 (species) | Not selected in the final model but high collinearity with diversity. |
ROTC84days | Maximum ROTC observed 84 days before sampling date9. | 0.1667–0.3138 (°C by week) | Not selected in the final model but high collinearity with ROTCclim. |
SD84days | Standard deviations of the SST in the previous 84 days. | 0.2091–1.1063 (°C) | Not selected in the final model. |