Table 2 NRNS presence/absence and length distribution data statistics
From: Constructing a draft Indian cattle pangenome using short-read sequencing
Category | Number of contigs | Mean number of insertions per individual | Mean number individuals per insertion (of 68) | Total size (bp) | Largest Contig |
|---|---|---|---|---|---|
Two ends placed | 536 | 140 (26.12%) | 18 | 891,174 | 7171 |
One end placed | 1766 | 412 (23.33%) | 16 | 4,512,132 | 30,850 |
Unplaced | 10,763 | 1748 (16.24%) | 11 | 35,570,619 | 58,737 |
Total | 13,065 | 2300 (17.60%) | 12 | 40,973,925 | 58,737 |
Non-private only | 8402 | 2232 (26.57%) | 18 | 33,808,020 | 58,737 |
Private only | 4663 | 68 (0.01%) | 1 | 7,165,905 | 21,935 |
