Table 2 Marker genes used for the identification of cell types

From: Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution

NCBI ID

Gene name

Late stage 5

Stage 7

Ref.

LOC107440133

Pt-twist

pMES

Mesoderm

36, 80

LOC107451427

At_eW_012_A08

Endoderm, CM cells

Endoderm, extraembryonic cells

36

LOC107456525

Pt-Delta

pEND, cMES

Stripes

36

LOC107451717

Pt-ets4

CM cells

 

65, 81

LOC107444265

Pt-noggin-D

Extraembryonic region

 

38

LOC107457189

Pt-otd

Periphery

Head

72

LOC107438948

Pt-rhomboid

Intermediate region

 

38

LOC107438015

Pt-gas1

Center

Thorax

38

LOC107452006

Pt-AP2-A

Center

Opisthosoma

38

LOC107451809

Pt-hh

Periphery

Stripes

21, 36

LOC107447678

Pt-msx1

Center

Stripes

38

LOC107447988

Pt-noto1

Broad

Stripes

25

LOC107450741

Pt-six3-1

 

Anterior end

21

LOC107445228

Pt-prd2

Center, pMES

Stripes, posterior

38

LOC107452883

Pt-aslH

Posterior end

Stripes, posterior

38