Fig. 3: Diversity and abundance of bacterial genera and metabolites after in vitro fermentation of 299 genotypes from the Middle American diversity panel with three human microbiomes. | Communications Biology

Fig. 3: Diversity and abundance of bacterial genera and metabolites after in vitro fermentation of 299 genotypes from the Middle American diversity panel with three human microbiomes.

From: Genetic variation and historical breeding patterns in common bean (Phaseolus vulgaris L.) affect fermentation patterns by the human gut microbiome

Fig. 3

Bray-Curtis distance from the blank indicates the distance from the blank after fermentation; for microbiota composition, all 23 genera that were significant in the population structure study (Fig. 2) are shown (56 other genera showed significant differences and can be found in Supplementary Tables S9 and S10); “All” panels refer to the average across individual microbiotas (S768, S770, and S776); heatmap cells marked with asterisks indicate this landrace was significantly higher than the other landrace within panel and row (Kruskal-Wallis test with Benjamini-Hochberg-adjusted *p < 0.05, **p < 0.01, ***p < 0.001); abcd heatmap cells marked with different letters are significantly different within panel and row (Kruskal-Wallis test with Benjamini-Hochberg-adjusted p values followed by Dunn’s test to identify significant differences among market classes, p < 0.05); N = 3204 (n = 1056 per microbiome with 36 genotypes replicated seven times and the remainder plus fecal and fermented blanks replicated three times).

Back to article page