Fig. 6: MEL-C. | Communications Biology

Fig. 6: MEL-C.

From: Genetic variation and historical breeding patterns in common bean (Phaseolus vulgaris L.) affect fermentation patterns by the human gut microbiome

Fig. 6

A Heatmap showing the LOD scores for microbiome features with significant marker-trait associations within MEL-C across all three subjects; red indicates that the effect of the minor allele on that trait (feature) is higher than the major allele; blue indicates that the effect on that trait is lower in lines with the minor allele than the major allele. The bottom of the heatmap shows the genomic region of Pv05 corresponding to genomic positions 9,400,000-10,000,000 bp in the reference genome P. vulgaris G19833 (v2.1). B Beans depicting the proportion of lines in each market class of the MDP carrying genotypes associated with the major and minor GWAS alleles; each bean represents 10% of the lines of that market class. C Allelic effects of major and minor alleles for three strongly affected traits at MEL-C SNP position 9,615,026 bp plotted by genotype and by genotype X market class.

Back to article page