Fig. 3: Functional binding site probability prediction on TAR RNA.
From: RNA regulation mechanisms study using physics-informed machine learning
a The predicted probability of RNA functional binding sites along the TAR RNA sequence is determined by the network-informed ML method RNet. The blue shaded areas denote the regions with highest binding probabilities. The gray shading denotes the standard deviation across 5000 frames in the MD simulation trajectory. b The predicted binding probability is mapped onto the tertiary structure of TAR RNA, visualized with a cyan-white-maroon color bar.
