Extended Data Fig. 5: CNV analysis. | Nature Cancer

Extended Data Fig. 5: CNV analysis.

From: A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology

Extended Data Fig. 5: CNV analysis.

CNVkit segmentented copy numbers plot113 illustrates log2 CN ratios for the indicated models. The annotations (left) display HCI-line, model, passage, technology (i.e., SNPchip platform). Segmented copy number data is presented as log2 CN ratios indication amplifications (red) and deletions (blue). (Lower) Graph showing density plot of log2 CN ratios are colored according to the sequencing platform. Vertical bars indicate the thresholds set to define discrete amplifications and deletions.

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