Extended Data Fig. 5: Performances of clustering using different features. | Nature Cancer

Extended Data Fig. 5: Performances of clustering using different features.

From: Starfish infers signatures of complex genomic rearrangements across human cancers

Extended Data Fig. 5

a, Benchmarking CGR classification by replacing one feature from the five used in Fig. 1b. b, Benchmarking CGR classification by adding one feature. c, Six clusters formed using ten features. All features related to CGR CNV and SV properties are used. The SV breakpoint microhomology and insertion size are not used because these measures are not available in the experimentally induced CGRs. d, Benchmarking CGR classification by using ten features. In each benchmarking test in a, b and d, CGRs from five experimental studies are used. Each colored bar shows CGRs classified with the corresponding features in each study. The numbers of corrected classified CGRs and total CGRs are displayed above the bars.

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