Extended Data Fig. 5: Different Lineages (DL) accuracy measure distributions for HUNTRESS, ScisTree and SPhyR on simulated data with false positives, false negatives and missing entries.
From: Fast intratumor heterogeneity inference from single-cell sequencing data
Here n, m, fn, fp and na respectively, denote the number of cells, the number of mutations, the false negative, false positive error and missing entry rates in single-cell sequencing data. For each setting we report the distribution for each tool over 10 distinct trees of tumor progression. Each tool was allowed to run with a time limit of 48 hours (those cases that exceed the time limit are not included here). Note that each (violin) plot shows the maximum, center and minimum value of the data depicted, together with the probability density.
