Table 2 Genome information for MAGs carrying VOC degradation genes or McrA as a marker for methanogenesis.

From: Substrate-restricted methanogenesis and limited volatile organic compound degradation in highly diverse and heterogeneous municipal landfill microbial communities

MAG

JGI gene accession

MAG cov.

MAG comp.

MAG cont.

Relevant protein

MAG Phylum

Lowest named taxonomic classification

VOC degradation

 LW3_42

Ga0172380_100000381

17.09

96.89

1.45

EbdA

Gammaproteobacteria

F: Rhodocyclaceae

 

Ga0172380_10000181129

      
 

Ga0172380_1000070814

      
 

Ga0172380_1000072710

      
 

Ga0172380_100025954

      
 

Ga0172380_100042083

      
 

Ga0172380_100073127

      

 LW3_67

Ga0172380_1000040665

50.62

95.16

6.85

EbdA

Gammaproteobacteria

G: Sterolibacterium

 

Ga0172380_1000040668

      
 

Ga0172380_100008082

      

 LW3_68

Ga0172380_100006492

16.83

90.1

6.08

AbcA

Gammaproteobacteria

G: Sterolibacterium

 LW2_26

Ga0172382_100080076

118.64

97.01

0

DxmA

Actinobacteriota

F: Solirubrobacteraceae

Methanogenesis

 CLC_T1_10

Ga0172378_10000287

16.39

98.43

1.15

McrA

Thermoplasmatota

F: Methanomethylophilaceae

 CLC_T1_33

Ga0172378_10005622

8.03

89.11

0.81

McrA

Thermoplasmatota

G: Methanomethylophilus

 CLC_T1_68

Ga0172378_10009832

39.94

86.02

0.81

McrA

Thermoplasmatota

F: Methanomethylophilaceae

 CLC_T1_8

Ga0172378_10005098

14.81

92.34

0

McrA

Thermoplasmatota

F: Methanomethylophilaceae

 CLC_T2_100

Ga0172377_10002184

8.72

92.08

0.81

McrA

Thermoplasmatota

F: Methanomethylophilaceae

 CLC_T2_32

Ga0172377_10000074

9.59

87.9

0.81

McrA

Thermoplasmatota

F: Methanomethylophilaceae

 CLC_T2_5

Ga0172377_10038920

14.03

73.39

5.24

McrA

Thermoplasmatota

F: Methanomethylophilaceae

 CLC_T2_58

Ga0172377_10004413

11.28

85.96

5.88

McrA

Halobacterota

G: Methanoculleus

 CLC_T2_72

Ga0172377_10009827

6.36

74.06

0.31

McrA

Thermoplasmatota

G: Methanomethylophilus

 LW1_13

Ga0172381_10006707

15.69

95.1

1.96

McrA

Halobacterota

G: Methanothrix

 LW1_26

Ga0172381_10000056

42.32

96.93

1.31

McrA

Halobacterota

G: Methanoregula

 LW1_61

Ga0172381_10028869

18.16

72.69

3.59

McrA

Halobacterota

G: Methanoregula

 LW2_109

Ga0172382_10001117

10.44

94.37

3.47

McrA

Euryarchaeota

G: Methanofastidiosum

 LW2_65

Ga0172382_10003740

6.99

77.24

0

McrA

Thermoplasmatota

F: Methanomethylophilaceae

 LW2_73

Ga0172382_10006116

14.38

99.34

0

McrA

Halobacterota

G: Methanothrix

 LW3_11

Ga0172380_10022908

10.66

71.14

2.66

McrA

Halobacterota

G: Methanothrix

 LW3_55

Ga0172380_10015880

7.69

70.57

1.99

McrA

Halobacterota

G: Methanoregula

  1. MAG cov. average coverage of scaffolds within the MAG based on read mapping, MAG comp. MAG completion as calaculated by CheckM, MAG cont. MAG contamination as calculated by CheckM. Taxonomy is based on GTDB-Tk taxonomic assignment.
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