Fig. 4: Antibiotic resistance gene (ARG) abundance and prevalence in children microbiomes.
A total ARG abundance in Atlanta vs. Maputo datasets (figure key). B MAGs carrying most of the ARGs. Each raw represents a different genomospecies (taxonomic identity is provided on the right) and shows what fraction (figure key) of total ARGs in each sample (columns) is carried by the genomospecies. C Relative abundances (measured as Genome Equivalents or GEs; y-axis) of antibiotic resistance classes in each age group (x-axis) that showed significant differences in at least one age group comparison between the two locations. Padj 0.05* 0.01** 0.001***, based on Dunn’s test. Sample names are as in Fig. 1. D Prevalence of ARGs in E. coli MAGs and their co-occurrence with mobile elements (integrons and transposons). For the complete description of each ARG protein shown, see Table S10.
