Table 3 Significantly enriched transporter system genes and carbohydrate-active enzymes in the transcriptome of Polaribacter dokdonensis MED152 in co-culture with M. commoda RCC299.

From: Bacterial transcriptional response to labile exometabolites from photosynthetic picoeukaryote Micromonas commoda

Locus Tag

Protein ID

Fold Change

Description

CAZymes

 MED152_03905

WP_015480551.1

8.8

glycosyltransferase family 2 protein (GT2)

 MED152_05075

WP_015480781.1

7.4

amylo-(1,4 to 1,6) transglucosidase (GH13_8)

 MED152_05110

WP_015480788.1

4.7

trehalase (GH37)

 MED152_03915

WP_015480553.1

18.5

DUF4838 domain-containing protein (GH163)

 MED152_03105

WP_041383822.1

6

response regulator (GT2)

PUL3

 MED152_05075

WP_015480781.1

7.4

amylo-(1,4 to 1,6) transglucosidase (GH13_8)

 MED152_05080

WP_041383396.1

5.7

sugar kinase

 MED152_05110

WP_015480788.1

4.7

trehalase (GH37)

PUL5

 MED152_08485

WP_015481446.1

2.6

glucosamine-6-phosphate deaminase

 MED152_08490

WP_015481447.1

3.2

beta-N-acetylhexosaminidase (GH20, PUL5)

 MED152_08495

WP_015481448.1

4.5

N-acetylglucosamine kinase

  1. All genes have an adjusted p value ≤ 0.01.
  2. GH glycoside hydrolase, AA auxiliary activity, CE carbohydrate esterase, GT glycosyl transferases.