Table 2 Comparison of variants calls from NGS and Sanger sequencing.
From: Genomes and phenomes of a population of outbred rats and its progenitors
Call type | True positives | False positives (FPR) | False negatives (FNR) |
|---|---|---|---|
SNPs | 2290 | 63 (2.7%) | 475 (17.2%) |
Indels | 178 | 4 (2.2%) | 126 (41.4%) |
Structural variants | 10 | 2 (16.7%) | 19 (65.5%) |
