Table 1 Developmental processes of N2E genes in mouse

From: Network rewiring is an important mechanism of gene essentiality change

Developmental process

N2E genes

blastocyst development

Cul3, Smarcb1, Ada, Sp3, Junb

mammary gland development

Phb2, Atp7b

in utero embryonic development

Prmt1, Sin3a, Cul3, Slc30a1, Ccnb2, Smarcb1, Msh2, Ube2a, Mapk1, Myo1e, Mecom, Sp3, Ccnb1, Plcg1, Junb, Lig4, Fgfr1, Ada, Hsf1, Map2k1

immune system development

Exo1, Msh2, Maea, Ung, Sp3, Rps19, Slc11a2, Xrcc6, Lig4, Blm, Sgpl1, Msh6, G6pdx, Ccnb2, Mlh1, Myo1e, Tcea1, Ada, Hells, Sod2, Dnaja3

hemopoietic or lymphoid organ development

G6pdx, Ccnb2, Msh2, Myo1e, Maea, Sp3, Rps19, Slc11a2, Lig4, Blm, Sgpl1, Tcea1, Ada, Hells, Sod2, Dnaja3

positive regulation of developmental process

Hmgb1, Junb, Lig4, Xrcc6, Fgfr1, Ada, Map2k1, Mapk14

tube development

Phb2, Hmgb1, Timeless, Sp3, Ppp3r1, Ptges3, Fgfr1, Ada

gland development

Phb2, Atp7b, Fgfr1

chordate embryonic development

Msh2, Ube2a, Phgdh, Sp3, Junb, Lig4, Fgfr1, Map2k1, Prmt1, Sin3a, Cul3, Slc30a1, Ccnb2, Smarcb1, Mapk1, Myo1e, Mecom, Ccnb1, Plcg1, Ada, Hsf1, Atm

embryonic development ending in birth or egg hatching

Msh2, Ube2a, Phgdh, Sp3, Junb, Lig4, Fgfr1, Map2k1, Prmt1, Sin3a, Cul3, Slc30a1, Ccnb2, Smarcb1, Mapk1, Myo1e, Mecom, Ccnb1, Plcg1, Ada, Hsf1, Atm

blood vessel development

Myo1e, Mapk1, Sphk2, Vezf1, Junb, Ppap2b, Sgpl1, Atg5, Fgfr1, Map2k1, Mapk14