Table 2 List of putative DJ-1 genes in rice along with their chromosomal locations, alternative spliced forms, CDS, polypeptide length, isoelectric point, and localization etc (bp base pair, aa amino acid, Da daltons).
Gene | Protein | Chrom. No | Locus | CDS (bp) | CDS coordinate (5′ to 3′) | PP length (aa) | Mass (Da) | pI | Localization | Orthologous genes |
|---|---|---|---|---|---|---|---|---|---|---|
OsDJ-1A | OsDJ-1A | 1 | LOC_Os01g11860.1 | 1168 | 6412786 – 6419895 | 396 | 40437.2 | 4.46 | Cya,b | GRMZM2G102811, GRMZM2G127812, Sb03g001750 |
OsDJ-1B | OsDJ-1B | 1 | LOC_Os01g11880.1 | 1287 | 6432336 – 6436086 | 429 | 45305.5 | 6.19 | Cpa,b,c | Bradi2g07040, GRMZM2G024959, GRMZM2G102927, Sb03g001740 |
OsDJ-1C | OsDJ-1C.1 | 4 | LOC_Os04g57590.1 | 1164 | 34270848 – 34267734 | 388 | 41329.3 | 5.22 | Cya,b | AT3G02720(AtDJ-1d), Bradi5g25750, GRMZM2G077541, GSVIVG00035277001, POPTR_0004s07440, POPTR_0004s07460, POPTR_0017s01530, POPTR_0017s01540, Sb06g032470 |
OsDJ-1C.2 | LOC_Os04g57590.2 | 1140 | 34270715 – 34267734 | 380 | 40407.1 | 5.37 | Cya,b | |||
OsDJ-1C.3 | LOC_Os04g57590.3 | 999 | 34269693 – 34267734 | 333 | 35535.6 | 5.04 | Cya, Cpb | |||
OsDJ-1D | OsDJ-1D.1 | 5 | LOC_Os05g44330.1 | 1365 | 25796297 – 25803236 | 455 | 48673.6 | 8.57 | Cpa,b,c, Mia | AT4G34020(AtDJ-1c), Bradi3g38210, GRMZM2G117189, GSVIVG00031729001, POPTR_0009s10390, Sb07g022950 |
OsDJ-1D.2 | LOC_Os05g44330.2 | 1164 | 25796297 – 25803236 | 388 | 41532.2 | 8.29 | Cpa,b,c | |||
OsDJ-1D.3 | LOC_Os05g44330.3 | 1147 | 25796297 – 25800798 | 349 | 37509.5 | 6.63 | Cpa,b,c | |||
OsDJ-1D.4 | LOC_Os05g44330.4 | 717 | 25796297 – 25800798 | 239 | 25406.5 | 5.65 | Cpa,b,c | |||
OsDJ-1D.5 | LOC_Os05g44330.5 | 1365 | 25796297 – 25803236 | 455 | 48673.6 | 8.57 | Cpa,b,c, Mta | |||
OsDJ-1E | OsDJ-1E | 6 | LOC_Os06g3404 0.1 | 1332 | 19829657 – 19824521 | 444 | 46877.6 | 7.74 | Cpa,b,c | AT1G53280(AtDJ-1b), AT3G14990(AtDJ-1a), Bradi1g38760, GRMZM2G072909, GSVIVG00014220001, POPTR_0011s11320, Sb10g020910 |
OsDJ-1F | OsDJ-1F | 11 | LOC_Os11g3792 0.1 | 1191 | 22491418 – 22493083 | 397 | 41007.1 | 6.05 | Cpa,b, Cya, PMa | AT2G38860(AtDJ-1e), AT3G54600 (AtDJ-1f), Sb05g022900 |