Table 1 Strains and plasmids used in this study.
From: Mechanism of azithromycin inhibition of HSL synthesis in Pseudomonas aeruginosa
Strain or plasmid | Relevant genotype and/or phenotype | Source or reference |
|---|---|---|
PA strains | ||
PAO1 | Wild-type prototroph | This lab |
PA-ΔJP1 | ΔlasI derivative of PAO1, Tcr | ref. 1 |
PA-ΔlasI | ΔlasI derivative of PAO1 | This study |
PA-ΔrhlI | ΔrhlI derivative of PAO1 | This study |
PA-ΔlasIrhlI | ΔlasI derivative of PA-ΔrhlI | This study |
E. coli strains | ||
DH5α | F-, Φ80dlacZΔM15,recA1,endA1,gvrA96,thi-1,hsdR17 (rK−, M+) supE44, relA1,deoR, Δ(lacZYA-argF)U169,ApS,KmS | This lab |
SM10λpir | thi1, thr1, leuB6, supE44, tonA21, lacY1, recA::RP4-2-Tc::Mu λpir KmR | ref. 2 |
Plasmids | ||
pMD18T | ori (ColE1) Apr | TaKaRa |
pUC19 | ori (ColE1) Apr | TaKaRa |
pCVD442 | R6K ori, mobRP4, bla, sacB | ref. 3 |
pDS132 | Derived from pCVD442, without IS1 sequences. bla gene replaced by the cat gene, CR | ref. 4 |
pMD18-mob | 2.2 kb mob fragment from pCVD442 TA cloned into pMD18T, Apr | This study |
pMD18GM | 0.83 kb aaCC1 fragment from pBBR-LuxAB cloned into pMD18T, GMr | This study |
pBBR-LuxAB | luxAB, tra−, mob+, Gmr | ref. 5 |
pMD18AB | pMD18 with 1.1 kb upstream of lasI and 1 kb downstream of it, Apr | This study |
pUC19CD | pUC19 with 1.1 kb upstream of rhlI and 0.95 kb downstream of it, Apr | This study |
pG-ΔlasI | 832 bp GMr fragment from plasmid LuxAB cloned into pMD18BA, GMr, Apr | This study |
pGS-ΔlasI | 1.8 kb sacB fragment from pCVD442 cloned into pG-ΔlasI, GMr, Apr | This study |
pGSM-ΔlasI | 2.2 kb mob fragment from pCVD442 cloned into pGS-ΔlasI, GMr, Apr | This study |
pG-ΔrhlI | 832 bp GMr fragment from plasmid pBBR-LuxAB cloned into pUC19CD, GMr, Apr | This study |
pGS-ΔrhlI | 1.8 kb sacB fragment from pCVD442 cloned into pG-ΔrhlI, GMr, Apr | This study |
pGSM-ΔrhlI | 2.2 kb mob fragment from pCVD442 cloned into pGS-ΔrhlI, GMr, Apr | This study |