Table 2 Genomic regions associated with growth-related traits and sex dimorphism in Yellow River carp.
Traits | QTL name | LG | CI (cM) | No. of SNPs | LOD | Permutation* | Exp% | Nearest marker |
|---|---|---|---|---|---|---|---|---|
BW | qBW1 | 1 | 169.34–169.78 | 1 | 4.91 | 4.2 | 45.1 | snp034657 |
qBW7a | 7 | 60.3–60.9 | 4 | 3.97 | 3.8 | 11.2 | snp029272 | |
qBW7b | 7 | 64.92–68.13 | 14 | 4.18 | 3.8 | 11.6 | snp030451 | |
qBW7c | 7 | 71.12–74.06 | 8 | 3.88 | 3.8 | 11.2 | snp030717 | |
qBW7d | 7 | 89.98–90.93 | 5 | 4 | 3.8 | 30.5 | snp028769 | |
qBW7e | 7 | 97.4–97.63 | 2 | 4.59 | 3.8 | 40.9 | snp028874 | |
qBW7f | 7 | 99.53–100.01 | 2 | 4.02 | 3.8 | 12.3 | snp064916 | |
qBW8a | 8 | 110.47–111.17 | 9 | 4.93 | 4.2 | 16.6 | snp003905 | |
qBW8b | 8 | 137.04–140.47 | 1 | 4.92 | 4.2 | 12.4 | snp030579 | |
qBW20a | 20 | 101.88–103.99 | 13 | 4.12 | 4 | 12.5 | snp027051 | |
qBW20b | 20 | 112.01–113.35 | 12 | 4.08 | 4 | 12.2 | snp066338 | |
qBW20c | 20 | 118.65–122.51 | 25 | 4.97 | 4 | 15.5 | snp012238 | |
qBW27a | 27 | 58.77–59.76 | 16 | 4.29 | 4 | 36 | snp071640 | |
qBW27b | 27 | 123.07–124.09 | 2 | 4.68 | 4 | 35.6 | snp033523 | |
BL | qBL1 | 1 | 238.65–239.51 | 8 | 5.37 | 5.3 | 17.2 | snp024629 |
qBL20 | 20 | 119.65–121.56 | 9 | 4.17 | 3.7 | 17 | snp064795 | |
qBL27a | 27 | 106.05–107.09 | 1 | 3.93 | 3.7 | 14.4 | snp033534 | |
qBL27b | 27 | 123.07–123.47 | 1 | 3.71 | 3.7 | 17.3 | snp019515 | |
CW | qCW1 | 1 | 236.09–242.2 | 21 | 5.56 | 4.7 | 21.9 | snp015388 |
qCW10 | 10 | 19.74–22.62 | 2 | 4.53 | 4.2 | 23.3 | snp057007 | |
qCW16 | 16 | 90.08–90.22 | 10 | 3.93 | 3.9 | 14.2 | snp005616 | |
qCW37 | 37 | 4.94–8.97 | 13 | 4.93 | 4.1 | 38.8 | snp050105 | |
SD | qSD11a | 11 | 197.29–206.95 | 16 | 4.38 | 3.1 | 19.5 | snp033867 |
qSD11b | 11 | 211.87–223.35 | 28 | 4.42 | 3.1 | 19.7 | snp016532 | |
qSD11c | 11 | 289.88–290.39 | 1 | 3.11 | 3.1 | 14.3 | snp004413 | |
qSD11d | 11 | 301.75–302.75 | 2 | 3.58 | 3.1 | 16.2 | snp009064 | |
qSD43a | 43 | 55.47–55.90 | 1 | 2.76 | 2.7 | 12.8 | snp067977 | |
qSD43b | 43 | 58.46–59.13 | 1 | 2.76 | 2.7 | 12.8 | snp068014 | |
qSD43c | 43 | 63.59–63.75 | 6 | 2.73 | 2.7 | 12.6 | snp006435 |