Table 2 Genomic regions associated with growth-related traits and sex dimorphism in Yellow River carp.

From: An ultra-high density linkage map and QTL mapping for sex and growth-related traits of common carp (Cyprinus carpio)

Traits

QTL name

LG

CI (cM)

No. of SNPs

LOD

Permutation*

Exp%

Nearest marker

BW

qBW1

1

169.34–169.78

1

4.91

4.2

45.1

snp034657

qBW7a

7

60.3–60.9

4

3.97

3.8

11.2

snp029272

qBW7b

7

64.92–68.13

14

4.18

3.8

11.6

snp030451

qBW7c

7

71.12–74.06

8

3.88

3.8

11.2

snp030717

qBW7d

7

89.98–90.93

5

4

3.8

30.5

snp028769

qBW7e

7

97.4–97.63

2

4.59

3.8

40.9

snp028874

qBW7f

7

99.53–100.01

2

4.02

3.8

12.3

snp064916

qBW8a

8

110.47–111.17

9

4.93

4.2

16.6

snp003905

qBW8b

8

137.04–140.47

1

4.92

4.2

12.4

snp030579

qBW20a

20

101.88–103.99

13

4.12

4

12.5

snp027051

qBW20b

20

112.01–113.35

12

4.08

4

12.2

snp066338

qBW20c

20

118.65–122.51

25

4.97

4

15.5

snp012238

qBW27a

27

58.77–59.76

16

4.29

4

36

snp071640

qBW27b

27

123.07–124.09

2

4.68

4

35.6

snp033523

BL

qBL1

1

238.65–239.51

8

5.37

5.3

17.2

snp024629

qBL20

20

119.65–121.56

9

4.17

3.7

17

snp064795

qBL27a

27

106.05–107.09

1

3.93

3.7

14.4

snp033534

qBL27b

27

123.07–123.47

1

3.71

3.7

17.3

snp019515

CW

qCW1

1

236.09–242.2

21

5.56

4.7

21.9

snp015388

qCW10

10

19.74–22.62

2

4.53

4.2

23.3

snp057007

qCW16

16

90.08–90.22

10

3.93

3.9

14.2

snp005616

qCW37

37

4.94–8.97

13

4.93

4.1

38.8

snp050105

SD

qSD11a

11

197.29–206.95

16

4.38

3.1

19.5

snp033867

qSD11b

11

211.87–223.35

28

4.42

3.1

19.7

snp016532

qSD11c

11

289.88–290.39

1

3.11

3.1

14.3

snp004413

qSD11d

11

301.75–302.75

2

3.58

3.1

16.2

snp009064

qSD43a

43

55.47–55.90

1

2.76

2.7

12.8

snp067977

qSD43b

43

58.46–59.13

1

2.76

2.7

12.8

snp068014

qSD43c

43

63.59–63.75

6

2.73

2.7

12.6

snp006435

  1. Note: *Represents the chromosome-wide significance LOD threshold at P < 0.01.