Table 1 Match between ANGIOGENES and PubMed.

From: ANGIOGENES: knowledge database for protein-coding and noncoding RNA genes in endothelial cells

Organism

Query Term

# of Matched Genes

# of Genes in PubMed

Coverage (%)

Human

EXPRESSED:“HAoEC–Heart–Normal”

30,771

3,754

83.83

Human

EXPRESSED:“BECs–Skin–Normal”

20,300

3,142

70.17

Human

EXPRESSED:“HUVEC–Umbilical vein–Normal”

35,630

4,022

89.82

Human

EXPRESSED:“HHSEC–Liver–Normal”

20,618

3,020

67.44

Human

EXPRESSED:“HMVEC-D–Skin–Normal”

18,326

3,166

70.70

Mouse

EXPRESSED:“Tie2plus EC–Cerebral cortex–Normal”

18,952

2,993

82.43

Mouse

EXPRESSED:“C166–Yolk sac–Normal”

19,523

2,861

78.79

Mouse

EXPRESSED:“Tie2plus EC–kidney–Normal”

21,923

2,875

79.18

Mouse

EXPRESSED:“mES–Embryoid body–Normal”

18,850

2,674

73.64

Zebrafish

EXPRESSED:“LECs–Lymphatic–FACS isolation of Kaede photconverted red ECs”

13,647

799

63.56

  1. The percent coverage was calculated by dividing the “# of Gene IDs in PubMed” (the match between the query result of ANGIOGENES and Gene IDs listed under “endothelial” in PubMed) by ENSEMBL Gene IDs found associated to the term “endothelial” in PubMed.