Table 1 Utilization and efficiency of pepper CapSNP15K array among 1,019 investigated samples.

From: Development of a SNP array and its application to genetic mapping and diversity assessment in pepper (Capsicum spp.)

Materials

Number

Scorable

Located scaffold

Percentage (%)b

Count

Percentage (%)a

Count

Length (bp)

Quality control

6

8,003

62.92

5,013

2,688,775,059

80.28

Elite/landrace lines

399

8,003

62.92

5,013

2,688,775,059

80.28

BA3 × YNXML F2

297

5,828

45.82

3,682

2,451,521,991

73.19

BA3 × B702 F2c

317

7,932

62.36

5,001

2,671,564,846

79.76

All investigated

1,019

8,199

64.46

5,107

2,719,081,414

81.18

  1. aThe ratio of scorable loci to successfully synthesized 12,720 loci.
  2. bThe ratio of located scaffold length to that of Zunla-1 genome (3,349,397,670 bp).
  3. cThe detailed information will be published elsewhere.
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