Table 3 Human DEPDC and internal control genes and their primer sequences information.

From: Identification of DEP domain-containing proteins by a machine learning method and experimental analysis of their expression in human HCC tissues

Gene

Primer sequences

Tm(°C)

%GC

Product(bp)

DEPDC1-F

GAAGCAGTGGATTGGCTTTATG

62

45.5

136

DEPDC1-R

CCCACCTCCCTTTGATATCTTC

62

50.0

 

DEPDC1B-F

GGAAATTCTGAAAGTCCCTTTGG

62

43.5

98

DEPDC1B-R

CCATATCAGCTCCTGGGTATTT

62

45.5

 

DEPDC2-F

GAGCACAAAGCCAAGAGAGA

62

50.0

100

DEPDC2-R

TCCTACAGCATGCACAACAG

62

50.0

 

DEPDC3-F

GCAGAGAAATGGTGGAACTCT

62

47.6

105

DEPDC3-R

CTCCTGGTGCTACAGGAAATAC

62

50.0

 

DEPDC4-F

GAACCGTAGAGATGGCTTCTG

62

52.4

101

DEPDC4-R

GGGCCTGAAGAGAGTGAATAAT

62

45.5

 

DEPDC5-F

CTCCTGTGGCTTCTTGTTAGT

62

50.0

106

DEPDC5-R

TGATGTTGAGTGGGATGAAGAG

62

50.0

 

DEPDC6-F

TTGTGGTGCGAGGAAGTAAG

62

47.6

107

DEPDC6-R

CCGTTGACAGAGACGACAAA

62

45.5

 

DEPDC7-F

ACCTTCCACTTCTTGACTCCTTAC

57.8

45.8

155

DEPDC7-R

CGAGAGCCACTCATCTTCCTG

57.5

57.1

 

β-actin-F

CGTGCGTGACATTAAGGAGAAG

57.2

50.0

176

β-actin-R

GGAAGGAAGGCTGGAAGAGTG

57.5

57.1

 
  1. Note: F, forward; R, reverse.