Table 3 Pathways significantly correlated with telomere shortening in association with SLEs exposures

From: Transcriptomic analyses and leukocyte telomere length measurement in subjects exposed to severe recent stressful life events

 

Pathway

Molecules

1

Natural killer cell signaling

KIR3DL1, RRAS2, LAIR1, INPP5B, SYK, MAPK3, KIR3DL2, KIR2DL4, KIR3DL3

2

Phosphatidylglycerol biosynthesis II

GPAM, LPCAT4, PTPMT1, AGPAT1

3

Prostate cancer signaling

RRAS2, FOXO1, PA2G4, MAPK3, NFKBIE, NFKB2, GSTP1

4

Ephrin B signaling

GNAS, RGS3, MAPK3, GNAO1, ACP1, HNRNPK

5

CDP-diacylglycerol biosynthesis I

GPAM, LPCAT4, AGPAT1

6

MIF-mediated glucocorticoid regulation

MAPK3, NFKBIE, CD14, NFKB2

7

Triacylglycerol biosynthesis

GPAM, LPCAT4, AGPAT1, PLPP1

8

Role of NFAT in regulation of the immune response

GNAS, RRAS2, SYK, MAPK3, NFKBIE, GNAO1, MS4A2, MEF2A, NFKB2

9

Crosstalk between dendritic cells and natural killer cells

KIR3DL1, FSCN1, KIR3DL2, NFKB2, KIR2DL4, KIR3DL3

10

IL-1 signaling

IL1A, GNAS, NFKBIE, GNAO1, NFKB2, IRAK2

11

MIF regulation of innate immunity

MAPK3, NFKBIE, CD14, NFKB2

12

iNOS signaling

NFKBIE, CD14, NFKB2, IRAK2

13

LPS-stimulated MAPK signaling

RRAS2, MAPK3, NFKBIE, CD14, NFKB2

14

D-myo-inositol (1,4,5)-trisphosphate biosynthesis

PIP4K2B, PI4K2B, PLCH1

15

TNFR1 signaling

NAIP, CRADD, NFKBIE, NFKB2

16

PDGF signaling

RRAS2, ABL2, INPP5B, MAPK3, ACP1

17

fMLP signaling in neutrophils

ACTR2, GNAS, RRAS2, MAPK3, NFKBIE, NFKB2

18

Ephrin receptor signaling

ACTR2, GNAS, RGS3, RRAS2, PTPN13, MAPK3, GNAO1, ACP1

19

TNFR2 signaling

NAIP, NFKBIE, NFKB2

20

Glutathione-mediated detoxification

HPGDS, ANPEP, GSTP1

21

PPARα/RXRα activation

GNAS, RRAS2, PRKAB1, MAPK3, NFKBIE, CYP2C18, NFKB2, ACVR1C

22

Epithelial adherens junction signaling

EPN2, ACTR2, RRAS2, LMO7, TUBB4A, ACVR1C, FARP2

23

Histamine biosynthesis

HDC

24

Alanine biosynthesis III

NFS1

25

4-1BB signaling in T lymphocytes

MAPK3, NFKBIE, NFKB2

26

IL-6 signaling

IL1A, RRAS2, MAPK3, NFKBIE, CD14, NFKB2

27

Choline biosynthesis III

PLD3, PHKA1

28

Apoptosis signaling

NAIP, RRAS2, MAPK3, NFKBIE, NFKB2

29

TWEAK signaling

NAIP, NFKBIE, NFKB2

30

PI3K/AKT signaling

RRAS2, FOXO1, INPP5B, MAPK3, NFKBIE, NFKB2

31

IL-17A signaling in fibroblasts

MAPK3, NFKBIE, NFKB2

32

PPAR signaling

IL1A, RRAS2, MAPK3, NFKBIE, NFKB2

33

Superpathway of inositol phosphate compounds

ATP1A1, PTPN13, NUDT9, INPP5B, PIP4K2B, ACP1, PI4K2B, PLCH1

34

IL-15 signaling

RRAS2, SYK, MAPK3, NFKB2

35

Role of PI3K/AKT signaling in the pathogenesis of influenza

IFNA8, MAPK3, NFKBIE, NFKB2

36

Hepatic cholestasis

IL1A, GNAS, ABCC2, NFKBIE, CD14, NFKB2, IRAK2

37

Eicosanoid signaling

PTGFR, DPEP3, ALOX5AP, HPGDS

38

Phospholipase C signaling

ARHGEF5, GNAS, PLD3, RRAS2, SYK, MAPK3, MEF2A, NFKB2, RHOH

39

Angiopoietin signaling

RRAS2, FOXO1, NFKBIE, NFKB2

40

Erythropoietin signaling

RRAS2, MAPK3, NFKBIE, NFKB2

41

Insulin receptor signaling

RRAS2, FOXO1, TRIP10, INPP5B, MAPK3, ASIC3

42

Antioxidant action of vitamin C

PLD3, MAPK3, NFKBIE, NFKB2, SLC2A3

43

IL-10 signaling

IL1A, NFKBIE, CD14, NFKB2

44

Spermine biosynthesis

SMS

45

Cardiolipin biosynthesis II

PTPMT1

46

Putrescine biosynthesis III

AZIN2

47

Cholecystokinin/gastrin-mediated signaling

IL1A, RRAS2, MAPK3, MEF2A, RHOH

48

Small cell lung cancer signaling

PA2G4, NFKBIE, NFKB2, SKP2

49

PEDF signaling

RRAS2, MAPK3, NFKBIE, NFKB2

50

B-cell receptor signaling

RRAS2, FOXO1, INPP5B, SYK, MAPK3, NFKBIE, NFKB2

51

Rac signaling

ACTR2, RRAS2, MAPK3, PIP4K2B, NFKB2

52

Role of RIG1-like receptors in antiviral innate immunity

IFNA8, NFKBIE, NFKB2

53

Systemic lupus erythematosus signaling

IL1A, RRAS2, IFNA8, PRPF3, MAPK3, SNRPB2, PRPF6, SNRPE

54

NF-KB activation by viruses

RRAS2, MAPK3, NFKBIE, NFKB2

55

Toll-like receptor signaling

IL1A, CD14, NFKB2, IRAK2

56

Fc epsilon RI signaling

RRAS2, INPP5B, SYK, MAPK3, MS4A2

  1. Abbreviations: IL, interleukin; SLE, stressful life events. All the 56 pathways from Ingenuity pathway analysis, using as input gene set the 405 genes significantly correlated between telomere shortening and SLEs (P-value<0.05).