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Showing 101–150 of 1471 results
Advanced filters: Author: Adam M. H. Young Clear advanced filters
  • This study introduces two new measures of brain function at the gray–white matter boundary, revealing distinct patterns of signal transmission and metabolic activity that deepen our understanding of brain organization and development.

    • Muwei Li
    • Lyuan Xu
    • John C. Gore
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • Cells typically migrate toward stiffer substrates via durotaxis, relying on focal adhesions. Here, the authors show that confined cells can migrate up friction gradients without focal adhesions, revealing a mode of directed migration called frictiotaxis.

    • Adam Shellard
    • Kai Weißenbruch
    • Roberto Mayor
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • Pocock et al. reveal that transient activation of 5′ AMP-activated protein kinase and estrogen-related receptor drives robust maturation of multicellular human cardiac organoids, enabling modeling of desmoplakin cardiomyopathy dysfunction, which could be rescued using the bromodomain and extra-terminal inhibitor INCB054329.

    • Mark W. Pocock
    • Janice D. Reid
    • James E. Hudson
    ResearchOpen Access
    Nature Cardiovascular Research
    Volume: 4, P: 821-840
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Variations in human brain frontoparietal functional connectivity and in signal complexity during intelligence tests relate to individual test performance. Results encourage exploring human intelligence across multiple spatial and temporal scales.

    • Jonas A. Thiele
    • Joshua Faskowitz
    • Kirsten Hilger
    ResearchOpen Access
    Communications Biology
    Volume: 9, P: 1-12
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Marin-Llaurado and colleagues engineer curved epithelial monolayers of controlled geometry and develop a new technique to map their state of stress. They show that pronounced stress anisotropies influence cell alignment.

    • Ariadna Marín-Llauradó
    • Sohan Kale
    • Xavier Trepat
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-11
  • Integrins regulate haematopoietic stem cell (HSC) homeostasis and engraftment into the bone marrow (BM) niche upon transplantation. Here, the authors show that HSC quiescence and function in the BM is regulated by the interaction of PERIOSTIN and INTEGRIN αv and subsequent increase in p27Kip1.

    • Satish Khurana
    • Sarah Schouteden
    • Catherine M. Verfaillie
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-14
  • A meta-analysis of genome-wide association studies of type 2 diabetes (T2D) identifies more than 600 T2D-associated loci; integrating physiological trait and single-cell chromatin accessibility data at these loci sheds light on heterogeneity within the T2D phenotype.

    • Ken Suzuki
    • Konstantinos Hatzikotoulas
    • Eleftheria Zeggini
    ResearchOpen Access
    Nature
    Volume: 627, P: 347-357
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • Argonaute proteins are key effectors in the microRNA pathway. Here, the authors show that the conserved peptidase DPF-3 regulates Argonautes in C. elegans, and that loss of dpf-3 restores function and fitness in animals lacking the microRNA Argonaute ALG-1.

    • Louis-Mathieu Harvey
    • Pierre-Marc Frédérick
    • Martin J. Simard
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • A study in eastern Canada finds that forest-management strategies that lead to simplified forest structure and composition have resulted in loss of breeding habitat and associated population losses for many bird species.

    • Matthew G. Betts
    • Zhiqiang Yang
    • Brian D. Gerber
    ResearchOpen Access
    Nature Ecology & Evolution
    Volume: 6, P: 709-719
  • A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.

    • Sarah E. Graham
    • Shoa L. Clarke
    • Cristen J. Willer
    Research
    Nature
    Volume: 600, P: 675-679
  • A cross-ancestry meta-analysis of genome-wide association studies identifies association signals for stroke and its subtypes at 89 (61 new) independent loci, reveals putative causal genes, highlighting F11, KLKB1, PROC, GP1BA, LAMC2 and VCAM1 as potential drug targets, and provides cross-ancestry integrative risk prediction.

    • Aniket Mishra
    • Rainer Malik
    • Stephanie Debette
    ResearchOpen Access
    Nature
    Volume: 611, P: 115-123
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Typical quantum error correcting codes assign fixed roles to the underlying physical qubits. Now the performance benefits of alternative, dynamic error correction schemes have been demonstrated on a superconducting quantum processor.

    • Alec Eickbusch
    • Matt McEwen
    • Alexis Morvan
    ResearchOpen Access
    Nature Physics
    Volume: 21, P: 1994-2001
  • Ancient, rock-derived organic matter is consumed by micro-organisms in Arctic fjord sediments despite its presumed limited bioavailability, representing a potential source of greenhouse gas emissions, according to compound-specific radiocarbon analyses of lipids from living bacteria.

    • Manuel Ruben
    • Jens Hefter
    • Gesine Mollenhauer
    ResearchOpen Access
    Nature Geoscience
    Volume: 16, P: 625-630
  • Experimental measurements of high-order out-of-time-order correlators on a superconducting quantum processor show that these correlators remain highly sensitive to the quantum many-body dynamics in quantum computers at long timescales.

    • Dmitry A. Abanin
    • Rajeev Acharya
    • Nicholas Zobrist
    ResearchOpen Access
    Nature
    Volume: 646, P: 825-830
  • The authors test whether experience-dependent neocortical modifications need Ube3a, an ubiquitin ligase implicated in autism and Angelman syndrome, using a mouse model of Angelman syndrome. They find that experience-dependent maturation of excitatory circuits in the visual cortex is impaired in these mice and that there are deficits in plasticity. This loss of plasticity was reversible with visual deprivation.

    • Koji Yashiro
    • Thorfinn T Riday
    • Benjamin D Philpot
    Research
    Nature Neuroscience
    Volume: 12, P: 777-783
  • Catalytic transformations involving main group compounds is much less developed than carbon chemistry. Here, the authors report the use of catalytic or stoichiometric tBuOK in presence of a hydrogen acceptor for efficient P–P and P–heteroatom coupling reactions.

    • Lipeng Wu
    • Vincent T. Annibale
    • Ian Manners
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-10
  • Wrinkling of cell nuclei is associated with disease. During development, the nucleus behaves like a sheet of paper and the wrinkling amplitude can be manipulated without changing its pattern.

    • Jonathan A. Jackson
    • Nicolas Romeo
    • Jasmin Imran Alsous
    Research
    Nature Physics
    Volume: 19, P: 1927-1935
  • Observations of a 3-million-year-old pre-main-sequence star with a misaligned disk reveal a giant orbiting planet; the system is ideal for studying the early formation and migration of planets.

    • Madyson G. Barber
    • Andrew W. Mann
    • Jesus Noel Villaseñor
    Research
    Nature
    Volume: 635, P: 574-577
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Wang et al. profile age-dependent miRNAomic changes in worm tissues and extracellular vesicles (EVs). They show that ageing controls miRNAs in a tissue-specific manner and their findings further suggest a complex EV-mediated miRNA trafficking network across tissues.

    • Xueqing Wang
    • Quanlong Jiang
    • Yidong Shen
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-16
  • Human WNT10A mutations are associated with dental defects and adult onset ectodermal dysplasia. Xuet al. show that WNT10A-activated ß-catenin plays dual roles in adult epithelial progenitor proliferation and differentiation by complexing with KLF4 in differentiating, but not proliferating, cells.

    • Mingang Xu
    • Jeremy Horrell
    • Sarah E. Millar
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-21
  • Serological profiles from two observational cohort studies in The Gambia characterize surrogates of protection against Streptococcus pyogenes and reveal an antibody response against antigens that are currently in vaccine development.

    • Alexander J. Keeley
    • Fatoumata E. Camara
    • Thushan I. de Silva
    ResearchOpen Access
    Nature Medicine
    Volume: 31, P: 3360-3371
  • The molecular and cellular mechanisms underlying ovarian aging are incompletely understood. Here the authors provide single-nuclei RNA and ATAC-seq of human ovarian tissue from four young and four reproductively aged donors, revealing coordinated transcriptomic and epigenomic changes across cell types and highlighting a role for mTOR signaling in reproductive aging.

    • Chen Jin
    • Xizhe Wang
    • Yousin Suh
    ResearchOpen Access
    Nature Aging
    Volume: 5, P: 275-290
  • An aged, senescent immune system has a causal role in driving systemic ageing, and the targeting of senescent immune cells with senolytic drugs has the potential to suppress morbidities associated with old age.

    • Matthew J. Yousefzadeh
    • Rafael R. Flores
    • Laura J. Niedernhofer
    Research
    Nature
    Volume: 594, P: 100-105
  • Adherens junctions (AJs) mediate cell-cell adhesion between epithelial cells but tools to study their dynamic regulation are lacking. Here the authors develop an optochemical tool to stimulate the assembly of AJs through addition of a photocleavable tool and their dissociation upon exposure to light.

    • Dirk Ollech
    • Tim Pflästerer
    • Elisabetta Ada Cavalcanti-Adam
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13