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Showing 1–3 of 3 results
Advanced filters: Author: Amaury Bignaud Clear advanced filters

  • Proximity-ligation-based sequencing from 111 samples and 5 environments reveals that a substantial proportion of phages infect multiple species.

    • Amaury Bignaud
    • Devon E. Conti
    • Martial Marbouty
    Research
    Nature Microbiology
    Volume: 10, P: 2537-2549

  • Here, by sub-kb Hi-C and chromosome engineering, the authors visualize bacterial transcriptional units, showing that they form transcription-induced domains. Transcription-induced domains enforce constraints on nearby sequences, affecting their localization and dynamics.

    • Amaury Bignaud
    • Charlotte Cockram
    • Romain Koszul
    ResearchOpen Access
    Nature Structural & Molecular Biology
    Volume: 31, P: 489-497

  • The Bioconductor project aims to develop R packages for analysis of genomic datasets. Here the authors show the HiCExperiment package suite and its companion online book (https://bioconductor.org/books/OHCA/) which present data structures, computational methods and visualization tools available in Bioconductor to investigate chromatin conformation capture (3C) data in R.

    • Jacques Serizay
    • Cyril Matthey-Doret
    • Romain Koszul
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-9