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Showing 1–9 of 9 results
Advanced filters: Author: Andrey N. Shkoporov Clear advanced filters

  • Here, the authors show that packaging of bacterial DNA by phage-like particles is widespread in the gut microbiome, with activity of gene transfer agents being prominent in Oscillospiraceae and Ruminococcaceae; and identifying lateral transduction by a temperate phage in Bacteroides.

    • Tatiana Borodovich
    • Colin Buttimer
    • Andrey N. Shkoporov
    ResearchOpen Access
    Nature Communications
    P: 1-16

  • Metagenomic analysis of the gut virome along the mammalian gastrointestinal tract of two mammalian species reveals the biogeography of bacteriophage, including region- and species-specific variations in virome composition.

    • Andrey N. Shkoporov
    • Stephen R. Stockdale
    • Colin Hill
    Research
    Nature Microbiology
    Volume: 7, P: 1301-1311

  • Bacteriophages are obligate parasites of their bacterial hosts; nevertheless, on a population level, phage–bacterium interactions can have beneficial outcomes. In this Review, Shkoporov, Turkington and Hill discuss the evidence for such mutualistic interactions in the gut microbiota and their roles.

    • Andrey N. Shkoporov
    • Christopher J. Turkington
    • Colin Hill
    Reviews
    Nature Reviews Microbiology
    Volume: 20, P: 737-749

  • Gut ecosystem colonization impacts lifelong health. Here, authors track mother-infant gut viruses over time, reveal feeding’s influence on early viral colonization, and demonstrate the co-transmission of bacteriophages and bacteria from mothers to infants.

    • Sanzhima Garmaeva
    • Trishla Sinha
    • Alexandra Zhernakova
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-19

  • A cryo-electron microscopy reconstruction of the virus ΦcrAss001 provides insights into the functions of the viral gene products in capsid assembly and infection.

    • Oliver W. Bayfield
    • Andrey N. Shkoporov
    • Alfred A. Antson
    ResearchOpen Access
    Nature
    Volume: 617, P: 409-416

  • In this Perspective, Joos, Ross and colleagues reflect on current approaches and the challenges of defining a 'healthy' microbiome, and propose an updated framework for interpreting these dynamic ecosystems by incorporating concepts from epidemiology into microbiome study design.

    • Raphaela Joos
    • Katy Boucher
    • R. Paul Ross
    Reviews
    Nature Reviews Microbiology
    Volume: 23, P: 192-205