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Advanced filters: Author: Andrzej Pastusiak Clear advanced filters

Metagenomic surveillance uncovers diverse and novel viral taxa in febrile patients from Nigeria

Applying metagenomics, the authors identify 13 viruses in febrile Nigerians, including a new dicistrovirus. Real-time phylogenetics spurred national vaccination campaigns, while retrospective analysis linked pegivirus C co-infections to favorable Lassa Fever outcomes.

Judith U. Oguzie
Brittany A. Petros
Christian T. Happi
ResearchOpen Access04 Aug 2023
Nature Communications

Volume: 14, P: 1-14
Pneumococcal within-host diversity during colonization, transmission and treatment

Longitudinal population deep sequencing of Streptococcus pneumoniae sampled from infants and their mothers improves our understanding of the dynamics of colonization, transmission, inter-strain competition and the impact of antibiotic treatment.

Gerry Tonkin-Hill
Clare Ling
Stephen D. Bentley
ResearchOpen Access10 Oct 2022
Nature Microbiology

Volume: 7, P: 1791-1804
A metagenomic analysis of the phase 2 Anopheles gambiae 1000 genomes dataset reveals a wide diversity of cobionts associated with field collected mosquitoes

A metagenomic analysis of 1,142 field-collected Anopheles gambiae mosquito specimens by the Microsoft Premonition Bayesian mixture model pipeline revealed a diverse set of vertebrate hosts, as well as the presence of Plasmodium parasites and other microbes.

Andrzej Pastusiak
Michael R. Reddy
Ethan K. Jackson
ResearchOpen Access30 May 2024
Communications Biology

Volume: 7, P: 1-11

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