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Showing 1–4 of 4 results
Advanced filters: Author: Arun Shivalingam Clear advanced filters
  • Guanine-rich oligonucleotides can fold into secondary structures known as G-quadruplexes that are proposed to have various biological roles. Here, Shivalingam et al. develop a cell-permeable, low-toxicity probe that can be used to probe interactions between G-quadruplexes and small molecules in vivo.

    • Arun Shivalingam
    • M. Angeles Izquierdo
    • Ramon Vilar
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-10
  • For CRISPR-Cas9 genome editing, Cas9 protein is guided to its target by single guide (sg) RNA. Here, the authors synthesised sgRNAs via convergent ‘click’ ligation of variable 20-mer RNAs that target the genome and a Cas9-binding 79-mer chimeric RNA/2´-OMe RNA of fixed sequence in a single tube.

    • Lapatrada Taemaitree
    • Arun Shivalingam
    • Tom Brown
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-8
  • The relationship between regulatory elements, chromatin interactions and gene expression during development remains poorly understood. Here the authors present Tiled-C, a low-input 3C approach to study genome architecture at high resolution, and apply it to mouse erythroid differentiation in vivo, finding that enhancer-promoter interactions are formed gradually during differentiation, concomitant with progressive upregulation of gene activity.

    • A. Marieke Oudelaar
    • Robert A. Beagrie
    • Jim R. Hughes
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12