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Showing 101–150 of 176 results
Advanced filters: Author: Benjamin M. Hunt Clear advanced filters
  • Free carriers and electrical polarization coexist in ferroelectric metals. Here, the authors use a capacitive method to probe the electronic compressibility of free carriers in a tunable semimetal, extract the polarized contribution, and study the carrier dependence of the ferroelectric state.

    • Sergio C. de la Barrera
    • Qingrui Cao
    • Benjamin M. Hunt
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-9
  • Coordination of neural activity between distant brain areas is necessary for cognition. Here, the authors report using MEG that various brain networks show dynamic phase coupling through specific frequency bands in the alpha and delta/theta range transiently during the resting state.

    • Diego Vidaurre
    • Laurence T. Hunt
    • Mark W. Woolrich
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-13
  • Cristen Willer and colleagues report genome-wide association analyses for blood lipid levels in 188,578 individuals. They identify 62 loci newly associated with blood lipid levels, refine the association signals at 12 loci and examine associations with cardiovascular and metabolic traits.

    • Cristen J Willer
    • Ellen M Schmidt
    • Gonçalo R Abecasis
    Research
    Nature Genetics
    Volume: 45, P: 1274-1283
  • The precise cell-type specific role of inhibitory interneurons in regulating sensory responses in the olfactory bulb is not known. Here, the authors report that removing GABAergic inhibition from one layer differentially affects response dynamics of the two main output cell types and changes odor mixture processing.

    • Gary Liu
    • Emmanouil Froudarakis
    • Benjamin R. Arenkiel
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-14
  • Cecilia Lindgren and colleagues report results of a large-scale genome-wide association study for waist-to-hip ratio, a measure of body fat distribution. They identify 13 new loci associated with this trait, several of which show stronger effects in women than in men.

    • Iris M Heid
    • Anne U Jackson
    • Cecilia M Lindgren
    Research
    Nature Genetics
    Volume: 42, P: 949-960
  • A genome-wide association study of critically ill patients with COVID-19 identifies genetic signals that relate to important host antiviral defence mechanisms and mediators of inflammatory organ damage that may be targeted by repurposing drug treatments.

    • Erola Pairo-Castineira
    • Sara Clohisey
    • J. Kenneth Baillie
    Research
    Nature
    Volume: 591, P: 92-98
  • An analysis of 16 health-related quantitative traits in approximately 350,000 individuals reveals statistically significant associations between genome-wide homozygosity and four complex traits (height, lung function, cognitive ability and educational attainment); in each case increased homozygosity associates with a decreased trait value, but no evidence was seen of an influence on blood pressure, cholesterol, or ten other cardio-metabolic traits.

    • Peter K. Joshi
    • Tonu Esko
    • James F. Wilson
    Research
    Nature
    Volume: 523, P: 459-462
  • Activation of intracellular signaling pathways can result in MHC binding to and presentation of phosphorylated peptides. Engelhard and colleagues identify a unique phosphorylated peptide–MHC binding mode that allows solvent exposure of phosphorylated residues.

    • Fiyaz Mohammed
    • Mark Cobbold
    • Benjamin E Willcox
    Research
    Nature Immunology
    Volume: 9, P: 1236-1243
  • Jose Florez, Claudia Langenberg, Erik Ingelsson, Inga Prokopenko, Inês Barroso and colleagues perform large-scale association analyses using the Metabochip to gain further insights into the genetic architecture of glucose regulation. They identify 38 new loci influencing 1 or more glycemic traits and show that many of these loci also modify risk of type 2 diabetes.

    • Robert A Scott
    • Vasiliki Lagou
    • Inês Barroso
    Research
    Nature Genetics
    Volume: 44, P: 991-1005
  • This overview of the ENCODE project outlines the data accumulated so far, revealing that 80% of the human genome now has at least one biochemical function assigned to it; the newly identified functional elements should aid the interpretation of results of genome-wide association studies, as many correspond to sites of association with human disease.

    • Ian Dunham
    • Anshul Kundaje
    • Ewan Birney
    ResearchOpen Access
    Nature
    Volume: 489, P: 57-74
  • Sexual dimorphism in genetic vulnerability to schizophrenia, systemic lupus erythematosus and Sjögren’s syndrome is linked to differential protein abundance from alleles of complement component 4.

    • Nolan Kamitaki
    • Aswin Sekar
    • Steven A. McCarroll
    Research
    Nature
    Volume: 582, P: 577-581
  • Any worthwhile guideline must be evidence-based, or should it? Evidence for the construction of guidelines often comes from clinical trials that are performed in the West according to the priorities and goals of that population and those of the pharmaceutical industry whose resources are relied upon to perform such trials. This Viewpoint article discusses the development of guidelines using an evidence-based approach and whether this approach is applicable worldwide.

    • M Fried
    • EMM Quigley
    • R Horton
    Reviews
    Nature Clinical Practice Gastroenterology & Hepatology
    Volume: 5, P: 60-61
  • Clinical Guidelines are primarily developed in the affluent West. This Viewpoint article discusses whether these guidelines are really useful and relevant to resource-poor, developing countries, and whether attempts to adhere to such guidelines obscure more fundamental issues such as the provision of basic health care. The authors argue that if guidelines are adapted to local resources and needs, and employ a 'cascade' approach they can work.

    • M Fried
    • EMM Quigley
    • R Horton
    Reviews
    Nature Clinical Practice Gastroenterology & Hepatology
    Volume: 5, P: 2-3
  • Evidence-based guidelines from wealthy countries define optimum goals for resource-constrained countries. This Viewpoint article discusses how health-care policy in developing countries can only be influenced through local involvement in the construction and implementation of guidelines. The authors also discuss the potential yet controversial role of the biomedical industry in facilitating the development and dissemination of global guidelines.

    • M Fried
    • EMM Quigley
    • R Horton
    Reviews
    Nature Clinical Practice Gastroenterology & Hepatology
    Volume: 5, P: 120-121
  • Monolayer transition-metal dichalcogenide (TMD) is promising to host features of topological superconductivity. Here, de la Barrera et al. study layered compounds, 2H-TaS2 and 2H-NbSe2, in their atomic layer limit and find a largest upper critical field for an intrinsic TMD superconductor.

    • Sergio C. de la Barrera
    • Michael R. Sinko
    • Benjamin M. Hunt
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-8
  • Kyle Gaulton, Mark McCarthy, Andrew Morris and colleagues report fine mapping and genomic annotation of 39 established type 2 diabetes susceptibility loci. They find that the set of potential causal variants is enriched for overlap with FOXA2 binding sites in human islet and liver cells, and they show that a likely causal variant near MTNR1B increases FOXA2-bound enhancer activity, providing a molecular mechanism to explain the effect of this locus on disease risk.

    • Kyle J Gaulton
    • Teresa Ferreira
    • Andrew P Morris
    Research
    Nature Genetics
    Volume: 47, P: 1415-1425
  • De novo enzyme designs have generally tried to optimize multiple aspects of enzyme function simultaneously. Focusing only on positioning of active site residues to generate a nucleophilic serine as assessed by activity-based protein profiling now leads to a successful intermediate design.

    • Sridharan Rajagopalan
    • Chu Wang
    • David Baker
    Research
    Nature Chemical Biology
    Volume: 10, P: 386-391
  • The accumulation and subsequent recycling of carbonate in the crust may have helped to drive the oxygenation of the early Earth, according to an ocean and atmosphere box model incorporating the inorganic carbon cycle.

    • Lewis J. Alcott
    • Craig Walton
    • Benjamin J. W. Mills
    ResearchOpen Access
    Nature Geoscience
    Volume: 17, P: 458-464
  • Using whole-genome data for single-nucleotide polymorphism and results from genome-wide association studies, the authors show that people’s preference for pairing with those with similar phenotypic traits has genetic causes and consequences.

    • Matthew R. Robinson
    • Aaron Kleinman
    • Peter M. Visscher
    Research
    Nature Human Behaviour
    Volume: 1, P: 1-13
  • In this Opinion article, Hunt and Hayden highlight that many of the models for reward-based choice are based on distinct component processes that occur in series and are functionally localized. They argue that, instead, such choice emerges from repeated computations that are undertaken in many brain areas.

    • Laurence T. Hunt
    • Benjamin Y. Hayden
    Reviews
    Nature Reviews Neuroscience
    Volume: 18, P: 172-182
  • The effect of sequence variants on phenotypes may depend on parental origin. Here, a method is developed that takes parental origin — the impact of which, to date, has largely been ignored — into account in genome-wide association studies. For 38,167 Icelanders genotyped, the parental origin of most alleles is determined; furthermore, a number of variants are found that show associations specific to parental origin, including three with type 2 diabetes.

    • Augustine Kong
    • Valgerdur Steinthorsdottir
    • Kari Stefansson
    Research
    Nature
    Volume: 462, P: 868-874
  • Colleagues with critiques want the same thing as you: to understand the world.

    • Ben de Haas
    Comments & Opinion
    Nature
    Volume: 589, P: 331
  • Results for the final phase of the 1000 Genomes Project are presented including whole-genome sequencing, targeted exome sequencing, and genotyping on high-density SNP arrays for 2,504 individuals across 26 populations, providing a global reference data set to support biomedical genetics.

    • Adam Auton
    • Gonçalo R. Abecasis
    • Gonçalo R. Abecasis
    ResearchOpen Access
    Nature
    Volume: 526, P: 68-74
  • The sudden collapse of thawing soils in the Arctic might double the warming from greenhouse gases released from tundra, warn Merritt R. Turetsky and colleagues.

    • Merritt R. Turetsky
    • Benjamin W. Abbott
    • A. Britta K. Sannel
    Comments & Opinion
    Nature
    Volume: 569, P: 32-34
  • Keri Monda, Kari North, Christopher Haiman and colleagues report a meta-analysis of GWAS for body mass index that is composed of 39,144 individuals of African ancestry, followed by further genotyping in 32,268 individuals of African ancestry. The study also includes analysis of publicly available data from the GIANT consortium of ~124,000 individuals of European ancestry. The paper reports evidence for two new loci near GALNT10 and MIR148A.

    • Keri L Monda
    • Gary K Chen
    • Christopher A Haiman
    Research
    Nature Genetics
    Volume: 45, P: 690-696
  • Siddiqui et al. explore the role of islet-specific XBP1 expression in type 2 diabetes (T2D) and glycemic traits across diverse ancestries. XBP1 eQTL is associated with T2D, beta-cell function, HbA1c and drug response in East and South Asians in whom this variant is common and beta-cell dysfunction is a significant driver of early onset T2D.

    • Moneeza K. Siddiqui
    • Theo Dupuis
    • Ana Viñuela
    ResearchOpen Access
    Communications Medicine
    Volume: 5, P: 1-10
  • The authors summarize the history of the ENCODE Project, the achievements of ENCODE 1 and ENCODE 2, and how the new data generated and analysed in ENCODE 3 complement the previous phases.

    • Federico Abascal
    • Reyes Acosta
    • Richard M. Myers
    Reviews
    Nature
    Volume: 583, P: 693-698
  • Owing to the growing volumes of data from high-energy physics experiments, modern deep learning methods are playing an increasingly important role in all aspects of data taking and analysis. This Review provides an overview of key developments, with a focus on the search for physics beyond the standard model.

    • Georgia Karagiorgi
    • Gregor Kasieczka
    • David Shih
    Reviews
    Nature Reviews Physics
    Volume: 4, P: 399-412
  • Gonçalo Abecasis and colleagues report associations with fasting plasma glucose levels in a collection of ten genome–wide association scans from the MAGIC consortium. They find variants in the gene encoding melatonin receptor 1B that are associated with fasting glucose levels and, in a meta-analysis of 13 case-control studies, also show association with increased risk of type 2 diabetes.

    • Inga Prokopenko
    • Claudia Langenberg
    • Gonçalo R Abecasis
    Research
    Nature Genetics
    Volume: 41, P: 77-81
  • A high-quality sequence assembly of the zebrafish genome reveals the largest gene set of any vertebrate and provides information on key genomic features, and comparison to the human reference genome shows that approximately 70% of human protein-coding genes have at least one clear zebrafish orthologue.

    • Kerstin Howe
    • Matthew D. Clark
    • Derek L. Stemple
    ResearchOpen Access
    Nature
    Volume: 496, P: 498-503