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Showing 1–3 of 3 results

Advanced filters: Author: Brayon Fremin Clear advanced filters

Single-cell and spatially resolved interactomics of tooth-associated keratinocytes in periodontitis

Here, Easter et al. generate a single-cell atlas of human periodontium including sulcular and junctional keratinocytes. Cell-cell communication analysis is used to predict keratinocyte-specific immune cell interactions.

Quinn T. Easter
Bruno Fernandes Matuck
Kevin M. Byrd
ResearchOpen Access14 Jun 2024
Nature Communications

Volume: 15, P: 1-23
MetaRibo-Seq measures translation in microbiomes

Defining the functions of individual organisms or communities within microbiomes is a challenging task. Here, the authors develop MetaRibo-Seq, a method for simultaneous high-throughput ribosome profiling of organisms in uncultured microbiome samples.

Brayon J. Fremin
Hila Sberro
Ami S. Bhatt
ResearchOpen Access29 Jun 2020
Nature Communications

Volume: 11, P: 1-12
Simultaneous ribosome profiling of hundreds of microbes from the human microbiome

This protocol outlines the experimental and computational steps of MetaRibo-Seq, a modified ribosome profiling approach that allows direct interrogation of translation in uncultured bacterial communities.

Brayon J. Fremin
Cosmos Nicolaou
Ami S. Bhatt
Protocols11 Aug 2021
Nature Protocols

Volume: 16, P: 4676-4691