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Showing 1–34 of 34 results
Advanced filters: Author: Christian M. T. Spahn Clear advanced filters
  • Stalled bacterial ribosomes can be rescued by interaction with SmpB protein and a highly structured transfer-messenger RNA, and a cryo-electron microscopy map of this complex now shows how EF-G-dependent translocation of this non-canonical ligand is facilitated by conformational changes in the ribosome and the transfer-messenger RNA.

    • David J. F. Ramrath
    • Hiroshi Yamamoto
    • Christian M. T. Spahn
    Research
    Nature
    Volume: 485, P: 526-529
  • Eukaryotic initiation factor 5b (eIF5B) is essential for translation initiation. Spahn and colleagues now report cryo-EM structures of the mammalian 80S initiation complex associated with eIF5B that redefine eIF5B as a tRNA reorientation factor.

    • Hiroshi Yamamoto
    • Anett Unbehaun
    • Christian M T Spahn
    Research
    Nature Structural & Molecular Biology
    Volume: 21, P: 721-727
  • The conserved eukaryotic heterotrimeric NatC complex co-translationally acetylates the N-termini of numerous target proteins. Here, the authors provide insights into the catalytic mechanism of NatC by determining the crystal structures of Saccharomyces cerevisiae NatC in the absence and presence of cofactors and peptide substrates and reveal the molecular basis of substrate binding by further biochemical analyses.

    • Stephan Grunwald
    • Linus V. M. Hopf
    • Oliver Daumke
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • During translation, tRNAs enter the ribosome and then move sequentially through three sites, known as A, P and E, as they transfer their attached amino acids onto the growing peptide chain. How the ribosome facilitates tRNA translocation between the sites remains largely unknown. Now a study uses multiparticle cryoelectron microscopy of a ribosome bound to the translation elongation factor, EF-G, to get information about tRNA movement. It identifies two new substates and sees that translocation is linked to unratcheting of the 30S ribosomal subunit.

    • Andreas H. Ratje
    • Justus Loerke
    • Christian M. T. Spahn
    Research
    Nature
    Volume: 468, P: 713-716
  • The crystal structures and cryo-electron microscopy reconstructions of eEF3 on its own and attached to the ribosome are resolved, providing an insight into how eEF3 functions as a translation factor on the A and E sites on a ribosome.

    • Christian B. F. Andersen
    • Thomas Becker
    • Roland Beckmann
    Research
    Nature
    Volume: 443, P: 663-668
  • The ribosomal GTPase, LepA or EF4, can promote back-translocation of tRNAs, thus reversing translocation. The cryo-EM structure of the ribosome with EF4 now suggests how such back-translocation can be allowed to occur and reveals that the tRNA is in an intermediate state that deviates from its canonical position.

    • Sean R Connell
    • Maya Topf
    • Christian M T Spahn
    Research
    Nature Structural & Molecular Biology
    Volume: 15, P: 910-915
  • Here the authors demonstrate how protein translation, controlled by Ire1α, regulates neuronal diversification in the developing neocortex.

    • Ekaterina Borisova
    • Andrew G. Newman
    • Mateusz C. Ambrozkiewicz
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-25
  • Xue et al. visualize how the antibiotic chloramphenicol reshapes the translation landscape and induces ribosome collision in bacterial cells, illuminating its context-dependent action across atomic, molecular and cellular scales.

    • Liang Xue
    • Christian M. T. Spahn
    • Julia Mahamid
    ResearchOpen Access
    Nature Structural & Molecular Biology
    Volume: 32, P: 257-267
  • mRNA surveillance is essential to maintain homeostasis in eukaryotes and is activated by mRNAs lacking a stop codon. Here the authors describe a high resolution cryo-EM structure of a nonstop complex that shows how arrested ribosome recognition is achieved during Dom34-mediated mRNA surveillance.

    • Tarek Hilal
    • Hiroshi Yamamoto
    • Christian M.T. Spahn
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-8
  • The production of ribosomes is a precisely orchestrated energy consuming cellular process of highest priority. Here, the authors use cryo-EM to show that bacterial ribosomal subunits, self-assembled from their purified RNA and protein components, mature along parallel pathways.

    • Bo Qin
    • Simon M. Lauer
    • Rainer Nikolay
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-10
  • Two-pore channel 2 has been implicated in coupling changes in cellular energy status with endolysosomal function. Grimm et al.show that mice lacking this channel display defects in endolysosomal trafficking of LDL-cholesterol and are susceptible to hepatic cholesterol overload and fatty liver disease.

    • Christian Grimm
    • Lesca M. Holdt
    • Christian Wahl-Schott
    Research
    Nature Communications
    Volume: 5, P: 1-13
  • The authors perform parallel transcriptome sequencing, tRNA qPCR array, ribosome profiling and mass spectrometry across five stages of mouse neocortex development to model the dynamic transcriptome-to-proteome transition, discovering a critical prenatal window during which translational control is predominant.

    • Dermot Harnett
    • Mateusz C. Ambrozkiewicz
    • Matthew L. Kraushar
    ResearchOpen Access
    Nature Structural & Molecular Biology
    Volume: 29, P: 1277-1290
  • Cryo-electron microscopy and single-molecule fluorescence methods are used to elucidate the mechanism of early translocation events on the bacterial ribosome.

    • Emily J. Rundlet
    • Mikael Holm
    • Scott C. Blanchard
    ResearchOpen Access
    Nature
    Volume: 595, P: 741-745
  • The prenyl-binding protein PrBP/δ is a solubilization factor involved in trafficking of prenylated proteins. Here the authors present the ligand-free apo-PrBP/δ structure and propose a "solubilization by depletion" mechanism, where PrBP/δ sequesters only soluble rod photoreceptor phosphodiesterase (PDE6), leading to a dissociation of membrane-bound PDE6.

    • Bilal M. Qureshi
    • Andrea Schmidt
    • Patrick Scheerer
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-12
  • Packing nanoparticles into ordered superstructures finds applications in photonic materials, but fabrication over large scales is challenging. Zhao et al. show a roll-to-roll approach to prepare flexible films of ordered polymer nanoparticles via an oscillatory shear-induced structural transition.

    • Qibin Zhao
    • Chris E. Finlayson
    • Jeremy J. Baumberg
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-10
  • A 2.2 Å cryo-electron microscopy structure of an actively translating 80S ribosome from tobacco reveals bound tRNA and mRNA, the nascent peptide and numerous cofactors, providing a basis for understanding the molecular mechanism of protein synthesis in plants.

    • Julia Smirnova
    • Justus Loerke
    • Reimo Zoschke
    ResearchOpen Access
    Nature Plants
    Volume: 9, P: 987-1000
  • Deep learning holds a great promise for the discovery and design of bioactive peptides, but experimental approaches to validate candidates in high throughput and at low cost are needed. Here, the authors combine deep learning and cell free biosynthesis for antimicrobial peptide (AMP) development and identify 30 functional AMPs, of which six with broad-spectrum activity against drug-resistant pathogens.

    • Amir Pandi
    • David Adam
    • Tobias J. Erb
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-14
  • To date, patients still succumb to cancer, due to tumors not responding to therapy or ultimately acquiring resistance. Here the authors show that by exploiting patient derived organoids and a treatment-naïve patient derived xenograft, patient therapy can be personalized.

    • Sofia Karkampouna
    • Federico La Manna
    • Marianna Kruithof-de Julio
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-13
  • The cryo-EM structure of the γ-tubulin ring complex (γ-TuRC) from Xenopus laevis provides insights into the molecular organization of the complex, and shows that actin is a structural component that is functionally relevant to microtubule nucleation.

    • Peng Liu
    • Erik Zupa
    • Elmar Schiebel
    Research
    Nature
    Volume: 578, P: 467-471
  • Radiation therapy combined with androgen-deprivation therapy has become the standard-of-care treatment for patients with high-risk prostate cancer; however, superiority of this approach over other therapeutic options, such as surgery, has not been clearly demonstrated. This Review provides a comprehensive overview of the current status of surgery in the treatment of high-risk prostate cancer and highlights the findings that might underlie the increasing use of radical prostatectomy as the first-line treatment among patients with this disease.

    • Christian Bach
    • Sailaja Pisipati
    • Anthony Koupparis
    Reviews
    Nature Reviews Urology
    Volume: 11, P: 342-351
  • In this Review, Nierhaus and colleagues discuss the recent structural and mechanistic insights that have improved our understanding of elongation factor G (EF-G)-mediated forward-translocation and EF-4-mediated back-translocation on the bacterial ribosome.

    • Hiroshi Yamamoto
    • Yan Qin
    • Knud H. Nierhaus
    Reviews
    Nature Reviews Microbiology
    Volume: 12, P: 89-100