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Showing 1–8 of 8 results
Advanced filters: Author: Chu-Yu Ye Clear advanced filters

  • Vavilovian mimicry is the phenomenon whereby weeds evolve to resemble co-located crop plants through unintentional human selection. Here the authors compare mimetic and non-mimetic populations of Echinochloa crus-galli (a weed mimic of rice) to characterize the genomic underpinnings of this case of Vavilovian mimicry.

    • Chu-Yu Ye
    • Wei Tang
    • Longjiang Fan
    Research
    Nature Ecology & Evolution
    Volume: 3, P: 1474-1482

  • Echinochloa is an important genus in the grass family as many of them are either problematic weeds or domesticated millets. Here, the authors assemble three polyploidy genomes in this genus using the diploid-assisted scaffolding method DipHic and provide genomic insights into the dual roles of some species as weeds and orphan crops.

    • Dongya Wu
    • Enhui Shen
    • Chu-Yu Ye
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-16

  • Genomics resources are crucial for discovering and producing phytochemicals with pharmacological activities. Here, the authors summarize current advancements and limitations in medicinal plant genomics and provide outlooks to move the field forward.

    • Ling-Tong Cheng
    • Zi-Long Wang
    • Chu-Yu Ye
    ReviewsOpen Access
    Nature Communications
    Volume: 16, P: 1-12

  • Understudied cereals offer untapped potential for food security, yet multiomic research substantially lags behind that of major cereals. This Perspective discusses these challenges and introduces a dedicated database to serve the community.

    • Fanjing Yang
    • Xiaojiao Gong
    • Chu-Yu Ye
    Reviews
    Nature Genetics
    Volume: 57, P: 2106-2115

  • Completion of genome sequences for the diploid Setaria italica reveals features of C4 photosynthesis that could enable improvement of the polyploid biofuel crop switchgrass (Panicum virgatum). The genetic basis of biotechnologically relevant traits, including drought tolerance, photosynthetic efficiency and flowering control, is also highlighted.

    • Jeffrey L Bennetzen
    • Jeremy Schmutz
    • Katrien M Devos
    ResearchOpen Access
    Nature Biotechnology
    Volume: 30, P: 555-561

  • The Eucalyptus grandis genome has been sequenced, revealing the greatest number of tandem duplications of any plant genome sequenced so far, and the highest diversity of genes for specialized metabolites that act as chemical defence and provide unique pharmaceutical oils; genome sequencing of the sister species E. globulus and a set of inbred E. grandis tree genomes reveals dynamic genome evolution and hotspots of inbreeding depression.

    • Alexander A. Myburg
    • Dario Grattapaglia
    • Jeremy Schmutz
    ResearchOpen Access
    Nature
    Volume: 510, P: 356-362