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Showing 1–4 of 4 results
Advanced filters: Author: Devlina Chakravarty Clear advanced filters
  • Studies on fold-switching proteins using AlphaFold reveal that the tool associates sequences of some proteins with structures it memorized during training, explaining its failure to predict correct structures of some recently characterized proteins.

    • Devlina Chakravarty
    • Joseph W. Schafer
    • Lauren L. Porter
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-13
  • Protein secondary structures–α-helices and β-sheets–are generally assumed to be fixed over evolutionary history. By leveraging sequence information and sensitive statistical techniques, this work proposes that secondary structures in naturally occurring DNA-binding proteins switched in response to stepwise mutation.

    • Devlina Chakravarty
    • Shwetha Sreenivasan
    • Lauren L. Porter
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-16