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Showing 1–8 of 8 results

Advanced filters: Author: Galen Xing Clear advanced filters

Consensus prediction of cell type labels in single-cell data with popV

Popular Vote (popV) is a simple, ensemble popular vote approach for cell type annotation in single-cell omic data, flexibly incorporating various methods in an open-source Python framework. Across various challenging input datasets, popV offers consistent, accurate performance.

Can Ergen
Galen Xing
Nir Yosef
ResearchOpen Access20 Nov 2024
Nature Genetics

Volume: 56, P: 2731-2738
Base-editing mutagenesis maps alleles to tune human T cell functions

Massive-scale mutational screening across 385 genes reveals a wide spectrum of alleles that govern tunable T cell functions, including cytokine production and cytotoxicity.

Ralf Schmidt
Carl C. Ward
Alexander Marson
Research13 Dec 2023
Nature

Volume: 625, P: 805-812
A Python library for probabilistic analysis of single-cell omics data

Adam Gayoso
Romain Lopez
Nir Yosef
Correspondence07 Feb 2022
Nature Biotechnology

Volume: 40, P: 163-166
NF-κB inhibitor alpha controls SARS-CoV-2 infection in ACE2-overexpressing human airway organoids

Camille R. Simoneau
Pei-Yi Chen
Melanie Ott
ResearchOpen Access04 Jul 2024
Scientific Reports

Volume: 14, P: 1-14
Publisher Correction: Cell types of origin of the cell-free transcriptome

Sevahn K. Vorperian
Mira N. Moufarrej
Stephen R. Quake
Amendments and CorrectionsOpen Access28 Mar 2022
Nature Biotechnology

Volume: 40, P: 974
Defining and benchmarking open problems in single-cell analysis

Malte D. Luecken
Scott Gigante
Smita Krishnaswamy
Correspondence01 Jul 2025
Nature Biotechnology

Volume: 43, P: 1035-1040
Cell types of origin of the cell-free transcriptome

Cell types affected by various diseases are inferred from cell-free RNA.

Sevahn K. Vorperian
Mira N. Moufarrej
Stephen R. Quake
ResearchOpen Access07 Feb 2022
Nature Biotechnology

Volume: 40, P: 855-861
The scverse project provides a computational ecosystem for single-cell omics data analysis

Isaac Virshup
Danila Bredikhin
Fabian J. Theis
Correspondence10 Apr 2023
Nature Biotechnology

Volume: 41, P: 604-606