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Showing 1–5 of 5 results
Advanced filters: Author: Haoquan Zhao Clear advanced filters
  • Understanding RNA regulation mechanisms is crucial for developing targeted therapies for diseases and elucidating how cells control gene expression. This study presents a physics-informed machine learning framework to investigate dynamic regulatory mechanisms in RNA complexes, which when applied to the P-TEFb/Tat/TAR system involved in HIV-1 transcriptional activation and the aaRS/tRNA system essential for genetic translation, outperforms existing methods for uncovering latent regulatory networks.

    • Haoquan Liu
    • Yanan Zhu
    • Yunjie Zhao
    ResearchOpen Access
    Communications Physics
    Volume: 9, P: 1-10
  • This study has developed a new method to predict RNA-protein interactions by combining graph neural networks and unsupervised large language models. The model showed superior performances by benchmark tests, especially for previously unseen RNAs and proteins.

    • Haoquan Liu
    • Yiren Jian
    • Yunjie Zhao
    ResearchOpen Access
    Communications Biology
    Volume: 8, P: 1-14
  • hPSCs model of Maturity Onset Diabetes of the Young caused by mutations in the transcription factor HNF1A (HNF1A-MODY), regulates the expression of genes required for the formation of dense-core insulin granules and calcium-dependent insulin secretion, demonstrating a basis to treat HNF1A-MODY patients with sulfonylureas.

    • Bryan J. González
    • Haoquan Zhao
    • Dieter Egli
    ResearchOpen Access
    Communications Biology
    Volume: 5, P: 1-17