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Showing 101–150 of 346 results
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  • Georgia Chenevix-Trench and colleagues report meta-analyses of genome-wide association studies identifying six loci newly associated with epithelial ovarian cancer (EOC). They also test variants at the 12 known and 6 new EOC susceptibility loci for association in BRCA1 and BRCA2 mutation carriers.

    • Karoline B Kuchenbaecker
    • Susan J Ramus
    • Georgia Chenevix-Trench
    Research
    Nature Genetics
    Volume: 47, P: 164-171
  • Phospholipid scramblase 1 (PLSCR1), a protein induced by IFNγ, acts as a defence factor against SARS-CoV-2 and other coronaviruses by inhibiting the fusion of the virus with host-cell membranes.

    • Dijin Xu
    • Weiqian Jiang
    • John D. MacMicking
    ResearchOpen Access
    Nature
    Volume: 619, P: 819-827
  • Geospatial estimates of child growth failure in Africa provide a baseline for measuring progress and a precision public health platform to target interventions to those populations with the greatest need.

    • Aaron Osgood-Zimmerman
    • Anoushka I. Millear
    • Simon I. Hay
    ResearchOpen Access
    Nature
    Volume: 555, P: 41-47
  • The female reproductive tract constitutes the ovary, fallopian tubes, uterus, and cervix, but it is challenging to engineer this systemin vitro. Here, the authors develop a microfluidic device (EVATAR) with reproductive tract and peripheral tissues to replicate hormone release of a 28-day menstrual cycle.

    • Shuo Xiao
    • Jonathan R. Coppeta
    • Teresa K. Woodruff
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-13
  • A consortium reports the tripling of the number of genetic markers in Phase II of the International HapMap Project. This map of human genetic variation will continue to revolutionize discovery of susceptibility loci in common genetic diseases, and study of genes under selection in humans.

    • Kelly A. Frazer (Principal Investigator)
    • Dennis G. Ballinger
    • John Stewart
    Research
    Nature
    Volume: 449, P: 851-861
  • The burial community at Gurgy ‘les Noisats’ (France) was genetically connected by two main pedigrees, spanning seven generations, that were patrilocal and patrilineal, with evidence for female exogamy and exchange with genetically close neighbouring groups.

    • Maïté Rivollat
    • Adam Benjamin Rohrlach
    • Wolfgang Haak
    ResearchOpen Access
    Nature
    Volume: 620, P: 600-606
  • The heterogeneity of whole-exome sequencing (WES) data generation methods presents a challenge to joint analysis. Here, the authors present a bioinformatics strategy to generate high-quality data from processing diversely generated WES samples, as applied in the Alzheimer’s Disease Sequencing Project.

    • Yuk Yee Leung
    • Adam C. Naj
    • Li-San Wang
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • The original Cancer Cell Line Encyclopedia (CCLE) is expanded with deeper characterization of over 1,000 cell lines, including genomic, transcriptomic, and proteomic data, and integration with drug-sensitivity and gene-dependency data.

    • Mahmoud Ghandi
    • Franklin W. Huang
    • William R. Sellers
    Research
    Nature
    Volume: 569, P: 503-508
  • Chromodomain Helicase DNA-binding (CHD) proteins have been implicated in neurodevelopmental processes. Here, the authors identify missense variants in CHD3 that disturb its chromatin remodeling activities and cause a neurodevelopmental disorder with macrocephaly and speech and language impairment.

    • Lot Snijders Blok
    • Justine Rousseau
    • Philippe M. Campeau
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-12
  • Paul Pharoah and colleagues report a genome-wide association study for survival time after diagnosis of epithelial ovarian cancer and a parallel analysis of susceptibility to epithelial ovarian cancer. They identified two SNPs at 19p13.11 that associated with susceptibility to the serous subtype of epithelial ovarian cancer.

    • Kelly L Bolton
    • Jonathan Tyrer
    • Simon A Gayther
    Research
    Nature Genetics
    Volume: 42, P: 880-884
  • Identification and characterization, using a comprehensive embryonic phenotyping pipeline, of 410 lethal alleles during the generation of the first 1,751 of 5,000 unique gene knockouts produced by the International Mouse Phenotyping Consortium.

    • Mary E. Dickinson
    • Ann M. Flenniken
    • Stephen A. Murray
    Research
    Nature
    Volume: 537, P: 508-514
  • Ice nucleating particles impact the global climate by altering cloud formation and properties, but the sources of these emissions are not completely characterized. Here, the authors show that secondary organic aerosols formed from the oxidation of organic gases in the atmosphere can be a source of ice nucleating particles.

    • Martin J. Wolf
    • Yue Zhang
    • Daniel J. Cziczo
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-9
  • MHC-I is expressed in neurons where it is implicated in synaptic plasticity and neuron regeneration. Here, Cebrián et al. report an increase in MHC-I expression in brain neurons from Parkinson’s disease patients, which is triggered by microglial activation and circulating dopamine.

    • Carolina Cebrián
    • Fabio A. Zucca
    • David Sulzer
    Research
    Nature Communications
    Volume: 5, P: 1-14
  • In this article, Ellen Rothenberg and colleagues review the key transcription factors and other regulatory factors involved in the processes of specification and commitment to the T-cell lineage, and outline the outstanding questions in the field.

    • Ellen V. Rothenberg
    • Jonathan E. Moore
    • Mary A. Yui
    Reviews
    Nature Reviews Immunology
    Volume: 8, P: 9-21
  • Autism is a highly heritable neurodevelopmental disorder, and yet few specific susceptibility genes have been identified to date. A linkage and association mapping study using half a million genome-wide single nucleotide polymorphisms is now described in a common set of 1,031 multiplex autism families. The linkage regions identified provide targets for rare variation screening whereas the discovery of a single novel association, SEMA5A, demonstrates the action of common variants.

    • Lauren A. Weiss
    • Dan E. Arking
    • Leena Peltonen
    Research
    Nature
    Volume: 461, P: 802-808
  • Jonathan Sebat and colleagues report the association of microduplication on chromosome 16p11.2 with schizophrenia, while the reciprocal microdeletion was associated with autism and developmental disorders.

    • Shane E McCarthy
    • Vladimir Makarov
    • Jonathan Sebat
    Research
    Nature Genetics
    Volume: 41, P: 1223-1227
  • Circulating lipoprotein(a) is an important risk factor for cardiovascular disease and shows variability between different ethnic groups. Here, Zekavat et al. perform whole-genome sequencing in individuals of European and African ancestries and find ancestry-specific genetic determinants for lipoprotein(a) levels.

    • Seyedeh M. Zekavat
    • Sanni Ruotsalainen
    • Sebastian Zoellner
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-14
  • Sequencing the nuclear genomes of Guillardia theta and Bigelowiella natans, transitional forms in the endosymbiotic acquisition of photosynthesis by engulfment of certain eukaryotic algae, reveals unprecedented alternative splicing for a single-celled organism (B. natans) and extensive genetic and biochemical mosaicism, shedding light on why nucleomorphs persist in these species but not other algae.

    • Bruce A. Curtis
    • Goro Tanifuji
    • John M. Archibald
    ResearchOpen Access
    Nature
    Volume: 492, P: 59-65
  • Atopic dermatitis (AD) and psoriasis (PSO) are associated with dysbiosis. Here, by analyses of skin microbiome and host transcriptome of AD and PSO patients, the authors find distinct microbial and disease-related gene transcriptomic signatures that differentiate both diseases.

    • Nanna Fyhrquist
    • Gareth Muirhead
    • Harri Alenius
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-15
  • Here 106 genomic loci associated with age at menarche, a marker of puberty timing in females, are identified; these loci show enrichment for genes involved in nuclear hormone receptor function, body mass index, and rare disorders of puberty, and for genes located in imprinted regions, with parent-of-origin specific effects at several loci.

    • John R. B. Perry
    • Felix Day
    • Ken K. Ong
    Research
    Nature
    Volume: 514, P: 92-97
  • Common genetic variants associated with plasma lipids have been extensively studied for a better understanding of common diseases. Here, the authors use whole-genome sequencing of 16,324 individuals to analyze rare variant associations and to determine their monogenic and polygenic contribution to lipid traits.

    • Pradeep Natarajan
    • Gina M. Peloso
    • Sebastian Zoellner
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-12
  • A meta-analysis of genome-wide association studies in more than 66,000 individuals identifies 68 new genomic loci that reliably associate with platelet count and volume, and reveals new gene functions.

    • Christian Gieger
    • Aparna Radhakrishnan
    • Nicole Soranzo
    Research
    Nature
    Volume: 480, P: 201-208
  • Previous studies identified an association between the 2q35 locus and breast cancer. Here, the authors show that a SNP at 2q35, rs4442975, is associated with oestrogen receptor positive disease and suggest that this effect is mediated through the downregulation of a known breast cancer gene, IGFBP5.

    • Maya Ghoussaini
    • Stacey L. Edwards
    • Anna De Fazio
    Research
    Nature Communications
    Volume: 5, P: 1-12
  • Cortex morphology varies with age, cognitive function, and in neurological and psychiatric diseases. Here the authors report 160 genome-wide significant associations with thickness, surface area and volume of the total cortex and 34 cortical regions from a GWAS meta-analysis in 22,824 adults.

    • Edith Hofer
    • Gennady V. Roshchupkin
    • Sudha Seshadri
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • Most DNA-encoded library (DEL) syntheses are limited by the presence of sensitive DNA-based constructs. Here, the authors develop DOSEDO, a diverse 3.7 million compound DEL, generated through diversity-oriented synthesis that provides enhanced scaffold and exit vector diversity and gives validated binding hits for multiple protein targets.

    • Liam Hudson
    • Jeremy W. Mason
    • Karin Briner
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-15
  • lt has been debated for decades if there is a genetic aetiology underlying Möbius syndrome, a neurological disorder characterized by facial paralysis. Here Tomas-Roca et al. use exome sequencing and identify de novo mutations in PLXND1 and REV3L, representing converging pathways in hindbrain development.

    • Laura Tomas-Roca
    • Anastasia Tsaalbi-Shtylik
    • Hans van Bokhoven
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • The Na+/H+ exchanger NHE9 is proposed to regulate the H+ electrochemical gradient across endosomal membranes. Here, the authors find that NHE9 knockout mice show autism spectrum disorder-like behaviors and disrupted synaptic vesicle exocytosis due to impaired presynaptic calcium entry.

    • Julie C. Ullman
    • Jing Yang
    • Robert H. Edwards
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-18
  • Perhaps the earliest known signs of life have been found in Quebec, where features such as haematite tubes suggest that filamentous microbes lived around hydrothermal vents at least 3,770 million years ago.

    • Matthew S. Dodd
    • Dominic Papineau
    • Crispin T. S. Little
    Research
    Nature
    Volume: 543, P: 60-64
  • Endometrial cancer is the most common invasive gynaecological cancer in developed countries. Here a meta-analysis identifies an additional nine novel endometrial cancer risk loci and eQTL analysis reveals risk variants associate with reduced expression of negative regulators of oncogenic signal transduction proteins.

    • Tracy A. O’Mara
    • Dylan M. Glubb
    • Deborah J. Thompson
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-12
  • Better analytical methods are needed to extract biological meaning from genome-wide association studies (GWAS) of psychiatric disorders. Here the authors take GWAS data from over 60,000 subjects, including patients with schizophrenia, bipolar disorder and major depression, and identify common etiological pathways shared amongst them.

    • Colm O'Dushlaine
    • Lizzy Rossin
    • Gerome Breen
    Research
    Nature Neuroscience
    Volume: 18, P: 199-209
  • Douglas Easton and colleagues report results of a large multistage genome-wide association study of breast cancer. The study identifies two new breast cancer risk loci on chromosomes 3p24 and 17q23.2.

    • Shahana Ahmed
    • Gilles Thomas
    • Douglas F Easton
    Research
    Nature Genetics
    Volume: 41, P: 585-590
  • Although vaccination drops COVID-19 mortality in older adults, post-vaccine fatal COVID-19 in nursing home outbreaks was linked to Delta, Gamma and Mu variants, persistently detected in aerosols. Mortality was predicted by IFNB1 or age, ORF7a and ACE2 mRNAs.

    • Lize Cuypers
    • Els Keyaerts
    • Johan Van Weyenbergh
    ResearchOpen Access
    Nature Aging
    Volume: 3, P: 722-733
  • Pyrin-only proteins (POPs) are primate-specific negative regulators of inflammasome activation. Here the authors generate transgenic mice expressing POP2 under the control of the human promoter, and show that POP2 is important for balancing antibacterial inflammatory responsesin vivo.

    • Sivakumar Periasamy
    • Kristen A. Porter
    • Jonathan A. Harton
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-12
  • Current classification criteria for rheumatoid arthritis allow its classification on the basis of the presence of erosions, in the absence of other indicators. Nevertheless, definition or quantitation of erosions was lacking. A European task force has now addressed this issue by analysing radiographic erosions in two cohorts of patients with early disease.

    • Jonathan Kay
    • Ellen M. Gravallese
    News & Views
    Nature Reviews Rheumatology
    Volume: 9, P: 323-324
  • Deficiency in mevalonate kinase causes autoinflammatory disease. Wang and colleagues define the detailed mechanistic basis that leads to this disease phenotype in mice and humans.

    • Murali K Akula
    • Man Shi
    • Donghai Wang
    Research
    Nature Immunology
    Volume: 17, P: 922-929