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Showing 1–13 of 13 results
Advanced filters: Author: Joyce Van Eck Clear advanced filters
  • A study developed genomic resources and efficient transformation in the orphan crop groundcherry, and managed to improve productivity traits by editing the orthologues of tomato domestication and improvement genes using CRISPR–Cas9.

    • Zachary H. Lemmon
    • Nathan T. Reem
    • Zachary B. Lippman
    Research
    Nature Plants
    Volume: 4, P: 766-770
  • Zachary Lippman and colleagues report mutations in the tomato ortholog of CLV1 and a gene encoding a hydroxyproline O-arabinosyltransferase enzyme that modifies CLV3, both of which cause fasciated flowers and fruits owing to increased meristem size. They also find that a natural mutation in CLV3 was a major target of selection during tomato domestication.

    • Cao Xu
    • Katie L Liberatore
    • Zachary B Lippman
    Research
    Nature Genetics
    Volume: 47, P: 784-792
  • Gene duplication and subsequent paralogue diversification shape phenotypes. This study shows how paralogues controlling stem cell proliferation evolve over short time scales and provides an evo-devo perspective for trait engineering in crop design.

    • Choon-Tak Kwon
    • Lingli Tang
    • Zachary B. Lippman
    Research
    Nature Plants
    Volume: 8, P: 346-355
  • Tomato breeding with a desirable MADS-box mutation to improve harvesting can often result in unwanted traits due to negative epistatis with cryptic mutations. A dosage mechanism involving a duplication of a second gene to overcoming the negative epistasis is dissected, enabling the design of gene editing strategies to predictably improve harvesting.

    • Sebastian Soyk
    • Zachary H. Lemmon
    • Zachary B. Lippman
    Research
    Nature Plants
    Volume: 5, P: 471-479
  • This paper reports the genome sequence of domesticated tomato, a major crop plant, and a draft sequence for its closest wild relative; comparative genomics reveal very little divergence between the two genomes but some important differences with the potato genome, another important food crop in the genus Solanum.

    • Shusei Sato
    • Satoshi Tabata
    • René M. Klein Lankhorst
    ResearchOpen Access
    Nature
    Volume: 485, P: 635-641
  • Zachary Lippman, José Jiménez-Gómez and colleagues show that cultivated tomatoes have lost day-length-sensitive flowering, compared to their wild relatives, as a result of cis-regulatory variation affecting expression of SP5G, a paralog of the florigen gene SFT. They engineered SP5G loss-of-function mutant plants, resulting in rapid flowering and early yield.

    • Sebastian Soyk
    • Niels A Müller
    • Zachary B Lippman
    Research
    Nature Genetics
    Volume: 49, P: 162-168
  • Gene editing may shape the future of foods, providing a sustainable solution for obtaining food products of high yield and nutritional value. This Review discusses the capabilities and applications of CRISPR–Cas-based gene editing of food, highlighting the technologies for improving the nutritional value of crops and animal and probiotic food products, and summarizing regulatory policies worldwide.

    • Aytug Tuncel
    • Changtian Pan
    • Yiping Qi
    Reviews
    Nature Reviews Bioengineering
    Volume: 1, P: 799-816