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Showing 1–9 of 9 results
Advanced filters: Author: Maxine Mackintosh Clear advanced filters
  • There are challenges with transferring genetic risk scores from ancestry in which they were generated to another. Here, the authors investigate the use of multi-ancestry versus single-ancestry training sets to construct polygenic scores and find that the optimal strategy varies across traits.

    • Brieuc Lehmann
    • Maxine Mackintosh
    • Chris Holmes
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-15
  • Vaccination is effective in protecting from COVID-19. Here the authors report immune responses and breakthrough infections in twice-vaccinated patients receiving anti-TNF treatments for inflammatory bowel disease, and find dampened vaccine responses that implicate the need of adapted vaccination schedules for these patients.

    • Simeng Lin
    • Nicholas A. Kennedy
    • Jeannie Bishop
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-14
  • New statistical and machine learning techniques to understand, quantify and correct for the impact of biases in genomic data are emerging. The authors review how the choice of analytical methods used to process, analyse and interpret genomic data can influence genomic research, as well as existing methodological approaches to promote equity and fairness in genomics.

    • Brieuc Lehmann
    • Leandra Bräuninger
    • Chris Holmes
    Reviews
    Nature Reviews Genetics
    Volume: 26, P: 635-649
  • Gathering big datasets has become an essential component of machine learning in many scientific areas, but it is unavoidable that some data values are missing. An important and growing effect that needs careful attention, especially when heterogeneous data sources are combined, is that of structured missingness, where data values are missing not at random, but with a specific structure.

    • Robin Mitra
    • Sarah F. McGough
    • Ben D. MacArthur
    Reviews
    Nature Machine Intelligence
    Volume: 5, P: 13-23
  • The DECIDE-AI checklist, resulting from a multi-stakeholder group of experts in a Delphi process and following the EQUATOR Network’s recommendations, includes key items that should be reported in early-stage clinical studies of AI-based decision support systems, to ensure a responsible and transparent deployment of AI systems in healthcare.

    • Baptiste Vasey
    • Myura Nagendran
    • Zane B. Perkins
    Reviews
    Nature Medicine
    Volume: 28, P: 924-933
  • Machine Intelligence (MI) is rapidly becoming an important approach across biomedical discovery, clinical research, medical diagnostics/devices, and precision medicine. Such tools can uncover new possibilities for researchers, physicians, and patients, allowing them to make more informed decisions and achieve better outcomes. When deployed in healthcare settings, these approaches have the potential to enhance efficiency and effectiveness of the health research and care ecosystem, and ultimately improve quality of patient care. In response to the increased use of MI in healthcare, and issues associated when applying such approaches to clinical care settings, the National Institutes of Health (NIH) and National Center for Advancing Translational Sciences (NCATS) co-hosted a Machine Intelligence in Healthcare workshop with the National Cancer Institute (NCI) and the National Institute of Biomedical Imaging and Bioengineering (NIBIB) on 12 July 2019. Speakers and attendees included researchers, clinicians and patients/ patient advocates, with representation from industry, academia, and federal agencies. A number of issues were addressed, including: data quality and quantity; access and use of electronic health records (EHRs); transparency and explainability of the system in contrast to the entire clinical workflow; and the impact of bias on system outputs, among other topics. This whitepaper reports on key issues associated with MI specific to applications in the healthcare field, identifies areas of improvement for MI systems in the context of healthcare, and proposes avenues and solutions for these issues, with the aim of surfacing key areas that, if appropriately addressed, could accelerate progress in the field effectively, transparently, and ethically.

    • Christine M. Cutillo
    • Karlie R. Sharma
    • Noel Southall
    Comments & OpinionOpen Access
    npj Digital Medicine
    Volume: 3, P: 1-5