Nature Search

Correction: Corrigendum: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Einar E. Nielsen
Alessia Cariani
Gary R. Carvalho
Amendments and Corrections15 Jul 2013
Nature Communications

Volume: 4, P: 1
Unexpected fishy microbiomes

This Genome Watch highlights recent metagenomics studies in fish that reveal unique microbiomes with low functional diversity, which could help to improve our understanding of host–microorganism dynamics in non-mammalian species.

Morten T. Limborg
Physilia Y. S. Chua
Jacob A. Rasmussen
News13 Mar 2023
Nature Reviews Microbiology

Volume: 21, P: 346
Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Catch certificates and eco-labels are used to control illegal fishing worldwide, however, independent control methods are needed. Here, gene-associated SNPs are used to assign individual marine fish back to their population of origin with high precision, with potential application for illegal fishing control.

Einar E. Nielsen
Alessia Cariani
Gary R. Carvalho
ResearchOpen Access22 May 2012
Nature Communications

Volume: 3, P: 1-7
Author Correction: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Einar E. Nielsen
Alessia Cariani
Gary R. Carvalho
Amendments and CorrectionsOpen Access22 Nov 2019
Nature Communications

Volume: 10, P: 1
Genomic and functional characterization of the Atlantic salmon gut microbiome in relation to nutrition and health

Using shotgun metagenomics, cultivation and metabolic modelling, the authors construct the Salmon Microbial Genome Atlas as a resource for future studies on sustainable aquaculture.

Arturo Vera-Ponce de León
Tim Hensen
Sabina Leanti La Rosa
Research14 Oct 2024
Nature Microbiology

Volume: 9, P: 3059-3074
Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

Jacob Rasmussen et al. use metagenomic analyses to examine the diversity of Mycoplasma species among three commonly-fished species of salmonids. Their results establish a phylogeny of candidate salmonid related Mycoplasma species and suggest a mutualistic relationship between these microbial species and salmon hosts.

Jacob A. Rasmussen
Kasper R. Villumsen
Morten T. Limborg
ResearchOpen Access14 May 2021
Communications Biology

Volume: 4, P: 1-10
Co-diversification of an intestinal Mycoplasma and its salmonid host

Jacob A. Rasmussen
Pia Kiilerich
Morten T. Limborg
ResearchOpen Access17 Feb 2023
The ISME Journal

Volume: 17, P: 682-692
The need for high-resolution gut microbiome characterization to design efficient strategies for sustainable aquaculture production

A multi-omic approach enables the reconstruction of microbial metabolic dynamics in the salmon gut in response to feed and feed supplements, outlining novel and potentially beneficial strategies to manipulate the salmon gut microbiota.

Shashank Gupta
Arturo Vera-Ponce de León
Sabina Leanti La Rosa
ResearchOpen Access25 Oct 2024
Communications Biology

Volume: 7, P: 1-10
Disentangling host–microbiota complexity through hologenomics

Hologenomic studies aim to further our understanding of host–microbiota interactions through the integrated analysis of host genomes and microbiota metagenomes. Here, Alberdi and colleagues discuss key considerations for designing optimal hologenomic studies and outline important biological questions that these studies can address.

Antton Alberdi
Sandra B. Andersen
M. Thomas P. Gilbert
Reviews21 Oct 2021
Nature Reviews Genetics

Volume: 23, P: 281-297

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Correction: Corrigendum: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Unexpected fishy microbiomes

Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Author Correction: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Genomic and functional characterization of the Atlantic salmon gut microbiome in relation to nutrition and health

Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

Co-diversification of an intestinal Mycoplasma and its salmonid host

The need for high-resolution gut microbiome characterization to design efficient strategies for sustainable aquaculture production

Disentangling host–microbiota complexity through hologenomics

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