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Showing 1–4 of 4 results

Advanced filters: Author: Niladri Basu Clear advanced filters

ExpressAnalyst: A unified platform for RNA-sequencing analysis in non-model species

RNA-sequencing data analysis is difficult for non-model species that have no reference genome. ExpressAnalyst enables RNA-sequencing analysis for any eukaryotic species in less than 24 h, on a laptop, and without any programming.

Peng Liu
Jessica Ewald
Jianguo Xia
ResearchOpen Access24 May 2023
Nature Communications

Volume: 14, P: 1-11
MetaboAnalystR 4.0: a unified LC-MS workflow for global metabolomics

Several bottlenecks exist in metabolomics data analysis. Here, the authors present MetaboAnalystR 4.0 as a unified workflow for LC-MS untargeted metabolomics. It highlights significant improvements in LC-MS2 spectral processing and functional analysis, providing an end-to-end computational pipeline.

Zhiqiang Pang
Lei Xu
Jianguo Xia
ResearchOpen Access01 May 2024
Nature Communications

Volume: 15, P: 1-15
Exposures of dental professionals to elemental mercury and methylmercury

Jaclyn M Goodrich
Hwai-Nan Chou
Niladri Basu
Research02 Sept 2015
Journal of Exposure Science & Environmental Epidemiology

Volume: 26, P: 78-85
Using MetaboAnalyst 5.0 for LC–HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data

LC–HRMS is used for metabolomics studies in the biomedical and environmental sciences. MetaboAnalyst (metaboanalyst.ca) can be used to address challenges in data processing, statistical analysis, functional interpretation and multi-omics integration.

Zhiqiang Pang
Guangyan Zhou
Jianguo Xia
Protocols17 Jun 2022
Nature Protocols

Volume: 17, P: 1735-1761