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Showing 1–6 of 6 results
Advanced filters: Author: P. Douglas Renfrew Clear advanced filters
    • P. W. FRANCIS
    • L. S. GLAZE
    • D. A. ROTHERY
    Research
    Nature
    Volume: 346, P: 519
  • Researchers mapped the protein structure landscape, revealing structural complementarity across databases and functional clustering in specific regions. Their web tool helps explore this space, unlocking new insights into protein roles, evolution, and diversity.

    • Paweł Szczerbiak
    • Lukasz M. Szydlowski
    • Tomasz Kosciolek
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Advances in protein structure prediction have led to a significant influx of protein structure data. Here the authors exploit this data to offer an unbiased overview of complex sequence-structure-function relationships in the protein universe. This work opens up new uses for 3D structure data repositories in meta-omics and other fields of biology.

    • Julia Koehler Leman
    • Pawel Szczerbiak
    • Tomasz Kosciolek
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-11
  • Genome-wide data from 400 individuals indicate that the initial spread of the Beaker archaeological complex between Iberia and central Europe was propelled by cultural diffusion, but that its spread into Britain involved a large-scale migration that permanently replaced about ninety per cent of the ancestry in the previously resident population.

    • Iñigo Olalde
    • Selina Brace
    • David Reich
    Research
    Nature
    Volume: 555, P: 190-196
  • The rapid increase in the number of proteins in sequence databases and the diversity of their functions challenge computational approaches for automated function prediction. Here, the authors introduce DeepFRI, a Graph Convolutional Network for predicting protein functions by leveraging sequence features extracted from a protein language model and protein structures.

    • Vladimir Gligorijević
    • P. Douglas Renfrew
    • Richard Bonneau
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-14