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Showing 1–50 of 59 results

Advanced filters: Author: R. S. Waples Clear advanced filters

Extensive standing genetic variation from a small number of founders enables rapid adaptation in Daphnia

Standing genetic variation allows natural populations to evolve rapidly. Genome sequences of a resurrected Daphnia population show that genetic variation carried by only five founding individuals from the regional genotype pool is enough to fuel rapid evolution in response to strong selection pressures with no evidence of genetic erosion.

Anurag Chaturvedi
Jiarui Zhou
Luc De Meester
ResearchOpen Access14 Jul 2021
Nature Communications

Volume: 12, P: 1-9
A method for detecting recent changes in contemporary effective population size from linkage disequilibrium at linked and unlinked loci

C M Hollenbeck
D S Portnoy
J R Gold
Research11 May 2016
Heredity

Volume: 117, P: 207-216
Improved confidence intervals for the linkage disequilibrium method for estimating effective population size

A T Jones
J R Ovenden
Y-G Wang
Research23 Mar 2016
Heredity

Volume: 117, P: 217-223
Life-history traits and effective population size in species with overlapping generations revisited: the importance of adult mortality

R S Waples
Research08 Jun 2016
Heredity

Volume: 117, P: 241-250
Estimating contemporary effective population size in non-model species using linkage disequilibrium across thousands of loci

R K Waples
W A Larson
R S Waples
Research24 Aug 2016
Heredity

Volume: 117, P: 233-240
Stock enhancement or sea ranching? Insights from monitoring the genetic diversity, relatedness and effective population size in a seeded great scallop population (Pecten maximus)

R Morvezen
P Boudry
G Charrier
Research29 Jun 2016
Heredity

Volume: 117, P: 142-148
Estimation of effective population size in continuously distributed populations: there goes the neighborhood

M C Neel
K McKelvey
R S Waples
Research08 May 2013
Heredity

Volume: 111, P: 189-199
Searching for genetic evidence of demographic decline in an arctic seabird: beware of overlapping generations

Emeline Charbonnel
Claire Daguin-Thiébaut
Thomas Broquet
Research05 Mar 2022
Heredity

Volume: 128, P: 364-376
Contrasting genetic trajectories of endangered and expanding red fox populations in the western U.S

Cate B. Quinn
Sophie Preckler-Quisquater
Benjamin N. Sacks
ResearchOpen Access21 Mar 2022
Heredity

Volume: 129, P: 123-136
Thermal alteration of Cretaceous black shale by basaltic intrusions in the Eastern Atlantic

Bernd R. T. Simoneit
Shmuel Brenner
I. R. Kaplan
Research15 Jun 1978
Nature

Volume: 273, P: 501-504
Off-ridge volcanism and seafloor spreading in the Shikoku Basin

G. DEV. KLEIN
K. KOBAYASHI
S. M. WHITE
Research29 Jun 1978
Nature

Volume: 273, P: 746-748
Sex change and effective population size: implications for population genetic studies in marine fish

I Coscia
J Chopelet
S Mariani
Research10 Aug 2016
Heredity

Volume: 117, P: 251-258
A longitudinal genetic survey identifies temporal shifts in the population structure of Dutch house sparrows

L Cousseau
M Husemann
L Lens
Research08 Jun 2016
Heredity

Volume: 117, P: 259-267
Effective size of a wild salmonid population is greatly reduced by hatchery supplementation

M R Christie
M L Marine
M S Blouin
Research18 Jul 2012
Heredity

Volume: 109, P: 254-260
Incorporating non-equilibrium dynamics into demographic history inferences of a migratory marine species

E. L. Carroll
R. Alderman
O. E. Gaggiotti
Research03 May 2018
Heredity

Volume: 122, P: 53-68
Applying new inter-individual approaches to assess fine-scale population genetic diversity in a neotropical frog, Eleutherodactylus ockendeni

K R Elmer
J A Dávila
S C Lougheed
Research15 Aug 2007
Heredity

Volume: 99, P: 506-515
Organic geochemical indicators of palaeoenvironmental conditions of sedimentation

B. M. Didyk
B. R. T. Simoneit
G. Eglinton
Research16 Mar 1978
Nature

Volume: 272, P: 216-222
Population structure, mating system, and sex-determining allele diversity of the parasitoid wasp Habrobracon hebetor

M F Antolin
P J Ode
M R Strand
Research26 Sept 2003
Heredity

Volume: 91, P: 373-381
Specific acyclic isoprenoids as biological markers of methanogenic bacteria in marine sediments

S. C. Brassell
A. M. K. Wardroper
G. Eglinton
Research23 Apr 1981
Nature

Volume: 290, P: 693-696
Temporal changes in allele frequencies but stable genetic diversity over the past 40 years in the Irish Sea population of thornback ray, Raja clavata

M Chevolot
J R Ellis
J L Olsen
Research07 May 2008
Heredity

Volume: 101, P: 120-126
Strong gene flow and lack of stable population structure in the face of rapid adaptation to local temperature in a spring-spawning salmonid, the European grayling (Thymallus thymallus)

C Junge
L A Vøllestad
C R Primmer
Research12 Jan 2011
Heredity

Volume: 106, P: 460-471
Changing patterns of population structure and gene flow at different spatial scales in Birgus latro (the coconut crab)

Shane Lavery
Craig Moritz
D R Fielder
Research01 May 1995
Heredity

Volume: 74, P: 531-541
Migration, gene flow and reproductive isolation between and within morphotypes of the isopod Excirolana in two oceans

H A Lessios
James R Weinberg
Research01 Dec 1993
Heredity

Volume: 71, P: 561-573
Direct measurement of active dispersal of food-falls by deep-sea demersal fishes

I. G. Priede
P. M. Bagley
N. R. Merrett
Research20 Jun 1991
Nature

Volume: 351, P: 647-649
Diagenesis of sediments beneath the Ross Ice Shelf and their sedimentary history

R. Raiswell
M. Md. Tan
Research06 Jun 1985
Nature

Volume: 315, P: 483-485
Effective population size in ecology and evolution

M Husemann
F E Zachos
J C Habel
Editorial24 Aug 2016
Heredity

Volume: 117, P: 191-192
Distinguishing recent dispersal from historical genetic connectivity in the coastal California gnatcatcher

Amy G. Vandergast
Barbara E. Kus
Kelly R. Barr
ResearchOpen Access04 Feb 2019
Scientific Reports

Volume: 9, P: 1-12
Artificial barriers prevent genetic recovery of small isolated populations of a low-mobility freshwater fish

R. A. Coleman
B. Gauffre
P. Sunnucks
ResearchOpen Access12 Jan 2018
Heredity

Volume: 120, P: 515-532
Detecting population structure using STRUCTURE software: effect of background linkage disequilibrium

R Kaeuffer
D Réale
D Pontier
Research11 Jul 2007
Heredity

Volume: 99, P: 374-380
Isoenzymes as an aid to clarify the taxonomy of French elms

N Machon
M Lefranc
J-P Henry
Research01 Jan 1995
Heredity

Volume: 74, P: 39-47
Genetic panmixia and demographic dependence across the North Atlantic in the deep-sea fish, blue hake (Antimora rostrata)

T A White
H A Fotherby
A R Hoelzel
Research18 Aug 2010
Heredity

Volume: 106, P: 690-699
Genomic signatures and correlates of widespread population declines in salmon

The Atlantic salmon has suffered widespread population declines over the last century. Here, Lehnert et al. reconstruct changes in effective population size of 172 populations based on genomic linkage information revealing mostly temperature-associated population declines with over 60% of populations in decline since 1975.

S. J. Lehnert
T. Kess
I. R. Bradbury
ResearchOpen Access05 Jul 2019
Nature Communications

Volume: 10, P: 1-10
Correction: Corrigendum: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Einar E. Nielsen
Alessia Cariani
Gary R. Carvalho
Amendments and Corrections15 Jul 2013
Nature Communications

Volume: 4, P: 1
Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Catch certificates and eco-labels are used to control illegal fishing worldwide, however, independent control methods are needed. Here, gene-associated SNPs are used to assign individual marine fish back to their population of origin with high precision, with potential application for illegal fishing control.

Einar E. Nielsen
Alessia Cariani
Gary R. Carvalho
ResearchOpen Access22 May 2012
Nature Communications

Volume: 3, P: 1-7
Haplotype frequency distribution and discriminatory power of two mtDNA fragments in a marine pelagic teleost (Atlantic herring, Clupea harengus)

L Hauser
C Turan
G R Carvalho
Research01 Dec 2001
Heredity

Volume: 87, P: 621-630
Fine-scale differentiation between sockeye salmon ecotypes and the effect of phenotype on straying

J Lin
T P Quinn
L Hauser
Research02 Jul 2008
Heredity

Volume: 101, P: 341-350
Southern marsh deer (Blastocerus dichotomus) populations assessed using Amplicon Sequencing on fecal samples

Laura I. Wolfenson
Javier A. Pereira
Patricia M. Mirol
ResearchOpen Access13 Jul 2024
Scientific Reports

Volume: 14, P: 1-11
Genetic subdivision of the intertidal snail Bembicium vittatum (Gastropoda: Littorinidae) varies with habitat in the Houtman Abrolhos Islands, Western Australia

M S Johnson
R Black
Research01 Oct 1991
Heredity

Volume: 67, P: 205-213
Cohort-wide deep whole genome sequencing and the allelic architecture of complex traits

Rare genetic variants can contribute to complex traits but this contribution is not well understood. Here, the authors analyse deep whole genome sequencing data across 1457 individuals from an isolated Greek population and find association of rare variant burdens with cardiometabolic traits.

Arthur Gilly
Daniel Suveges
Eleftheria Zeggini
ResearchOpen Access07 Nov 2018
Nature Communications

Volume: 9, P: 1-9
It’s a bear market: evolutionary and ecological effects of predation on two wild sockeye salmon populations

J E Lin
J J Hard
L Hauser
Research10 Feb 2016
Heredity

Volume: 116, P: 447-457
Contrasting patterns of population structure and gene flow facilitate exploration of connectivity in two widely distributed temperate octocorals

L P Holland
T L Jenkins
J R Stevens
ResearchOpen Access15 Mar 2017
Heredity

Volume: 119, P: 35-48
Spatio-temporal genetic tagging of a cosmopolitan planktivorous shark provides insight to gene flow, temporal variation and site-specific re-encounters

Lilian Lieber
Graham Hall
Leslie R. Noble
ResearchOpen Access03 Feb 2020
Scientific Reports

Volume: 10, P: 1-17
Molecular ecology meets remote sensing: environmental drivers to population structure of humpback dolphins in the Western Indian Ocean

M Mendez
A Subramaniam
H C Rosenbaum
Research23 Mar 2011
Heredity

Volume: 107, P: 349-361
Hidden diversity in the genus Tethya: comparing molecular and morphological techniques for species identification

Megan R. Shaffer
Simon K. Davy
James J. Bell
Research21 Aug 2018
Heredity

Volume: 122, P: 354-369
Detecting population structure in a high gene-flow species, Atlantic herring (Clupea harengus): direct, simultaneous evaluation of neutral vs putatively selected loci

C André
L C Larsson
N Ryman
Research16 Jun 2010
Heredity

Volume: 106, P: 270-280
Genomics of habitat choice and adaptive evolution in a deep-sea fish

Little is known about the role of aquatic depth gradients in promoting intraspecific differentiation. Here, the authors present an annotated genome assembly of the roundnose grenadier, a deep-sea fish in which re-sequencing data indicate genotypic segregation by depth.

Michelle R. Gaither
Georgios A. Gkafas
A. Rus Hoelzel
ResearchOpen Access05 Mar 2018
Nature Ecology & Evolution

Volume: 2, P: 680-687
A globally threatened shark, Carcharias taurus, shows no population decline in South Africa

Juliana D. Klein
Aletta E. Bester-van der Merwe
Peter R. Teske
ResearchOpen Access21 Oct 2020
Scientific Reports

Volume: 10, P: 1-8
Author Correction: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Einar E. Nielsen
Alessia Cariani
Gary R. Carvalho
Amendments and CorrectionsOpen Access22 Nov 2019
Nature Communications

Volume: 10, P: 1
Author Correction: Cohort-wide deep whole genome sequencing and the allelic architecture of complex traits

Arthur Gilly
Daniel Suveges
Eleftheria Zeggini
Amendments and CorrectionsOpen Access19 Dec 2018
Nature Communications

Volume: 9, P: 1
Microsatellite DNA analysis of population structure in Atlantic herring (Clupea harengus), with direct comparison to allozyme and mtDNA RFLP analyses

P W Shaw
C Turan
G R Carvalho
Research01 Oct 1999
Heredity

Volume: 83, P: 490-499

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