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Showing 1–50 of 91 results
Advanced filters: Author: Sebastian Bader Clear advanced filters
  • A large-scale study on the replicability of claims from social and behavioural science journals reports that about half of the results replicate in the same patterns as the original study.

    • Andrew H. Tyner
    • Anna Lou Abatayo
    • Timothy M. Errington
    Research
    Nature
    Volume: 652, P: 143-150
  • Several hydrides have been observed high-Tc superconductivity under pressure, but a physical-chemical understanding of the properties enhancing Tc is still lacking. Here, the authors propose a magnitude named as networking value, combined with hydrogen fraction and the contribution of hydrogen to the density of states at Fermi level, can predict Tc of all hydrogen-based compounds with an accuracy of about 60 K.

    • Francesco Belli
    • Trinidad Novoa
    • Ion Errea
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-11
  • Structural features of DNA double-strand break (DSB) ends play key roles in determining DNA repair pathway usage and outcomes. Here, the authors identify ERCC6L2, a poorly characterized ATPase, as playing a minimal role in blunt end DSB repair but crucial for repair of staggered end DSBs.

    • Eric J. Aird
    • Almudena Serrano-Benitez
    • Stephen P. Jackson
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-19
  • A versatile hydrothermal approach in an operando acidic environment created ferromagnetic single-atom spin catalysts (SASCs). Ni-based SASC exhibits a giant magnetic field enhancement of OER activity, boosting both water and saline water electrolysis.

    • Tao Sun
    • Zhiyuan Tang
    • Jiong Lu
    Research
    Nature Nanotechnology
    Volume: 18, P: 763-771
  • The recent claim of near-ambient superconductivity in nitrogen-doped lutetium hydrides has sparked great excitement and strong controversies in the community. Here, a comprehensive first-principles calculations study predicts the stability and critical temperatures of Lu-N-H compounds based on their composition and applied pressure.

    • Yue-Wen Fang
    • Đorđe Dangić
    • Ion Errea
    ResearchOpen Access
    Communications Materials
    Volume: 5, P: 1-12
  • Copper-exchanged zeolites with mordenite structure can mimic the active sites in particulate methane monooxygenase. Here, the authors show that mordenite micropores can stabilize trinuclear copper-oxo clusters that exhibit a high reactivity towards activation of carbon–hydrogen bonds in methane.

    • Sebastian Grundner
    • Monica A.C. Markovits
    • Johannes A. Lercher
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Spin-waves offer the potential for devices with novel functionalities but controlling their propagation is proving challenging. Here, the authors use locally generated magnetic fields to show how spin-waves can be manipulated to realize a spin-wave multiplexer.

    • K. Vogt
    • F.Y. Fradin
    • H. Schultheiss
    Research
    Nature Communications
    Volume: 5, P: 1-5
  • Huang et al. demonstrate an electrically controlled Fe–FePc molecular spin switch that reversibly changes its magnetic state and shifts a nearby spin’s resonance, showing potential of scalable, electrically tunable molecular quantum devices.

    • Wantong Huang
    • Kwan Ho Au-Yeung
    • Philip Willke
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • Metal-metal bonds between metal cations are ubiquitous in coordination complexes, whereas similar bonding characteristics between non-metal and metal cations are not. Here, the authors report an X-ray crystal structure of a centrosymmetric complex [Ag(m-O3SCF3)2{(4MePyNO)2I}]2 which features two unique I+–Ag+ bonds.

    • Rakesh Puttreddy
    • Niklas Limberg
    • Kari Rissanen
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • Fungal infections are severely underestimated as a cause of mortality, and alternative drugs are urgently needed. Here, Schaefer et al. show that a synthetic polymer mimicking defensins shows different, but synergistic activity with known antifungals.

    • Sebastian Schaefer
    • Raghav Vij
    • Sascha Brunke
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-22
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • Fast and specific detection of pathogenic bacteria is needed to combat infections. Here the authors generate an array of near-infrared biosensors based on carbon nanotubes to detect released metabolites and virulence factors and use them to distinguish pathogens such as S. aureus and P. aeruginosa.

    • Robert Nißler
    • Oliver Bader
    • Sebastian Kruss
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Quantum mechanical tunneling has so far been observed for heavy elements up to oxygen. Here, the authors use laser ablation to create a pentafluoride ion confined in a Ne matrix, where an F ion tunnels between two F2 units in a quasi-linear structure.

    • Carsten Müller
    • Frederik Bader
    • Jean Christophe Tremblay
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Electrifying energy-intensive processes is a promising approach for decarbonization. Now, 1,3-butadiene is electrochemically produced from acetylene on I−induced Cuδ+–Cu0 sites with a Faradaic efficiency of over 90% at −0.85 VSHE and a partial current density of −75 mA cm2 at −1.0 VSHE.

    • Wei Jie Teh
    • Eleonora Romeo
    • Boon Siang Yeo
    ResearchOpen Access
    Nature Catalysis
    Volume: 7, P: 1382-1393
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • Copper on ceria is an excellent catalyst for the low-temperature water–gas shift reaction. Here the active sites are directly imaged by electron microscopy and probed with in situ spectroscopy, showing that the reaction proceeds via a cooperative mechanism whereby the Cu+ chemically adsorbs CO while an adjacent Ov–Ce3+ site dissociatively activates H2O.

    • Aling Chen
    • Xiaojuan Yu
    • Wenjie Shen
    Research
    Nature Catalysis
    Volume: 2, P: 334-341
  • Manipulating spin states of molecules in a controllable manner is essential to develop the molecule-based spintronics technologies. Here, Ormaza et al. show how to use the interaction between a single metallocene molecule and a metallic surface to reversibly switch spin from 1 to ½ in a junction.

    • M. Ormaza
    • P. Abufager
    • L. Limot
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-8
  • Recently ideal spin filtering ability was demonstrated in the Dy-L-Tar metal-organic framework. In this work the authors show that this unusual effect emerges from the asymmetric display of alpha and beta spin states around the Fermi level, composed of the f states of the lanthanide.

    • Xuban Gastearena
    • Jesus M. Ugalde
    • Elisa Jimenez-Izal
    ResearchOpen Access
    Communications Physics
    Volume: 7, P: 1-6
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Some cancer patients first present with metastases where the location of the primary is unidentified; these are difficult to treat. In this study, using machine learning, the authors develop a method to determine the tissue of origin of a cancer based on whole sequencing data.

    • Wei Jiao
    • Gurnit Atwal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • The characterization of 4,645 whole-genome and 19,184 exome sequences, covering most types of cancer, identifies 81 single-base substitution, doublet-base substitution and small-insertion-and-deletion mutational signatures, providing a systematic overview of the mutational processes that contribute to cancer development.

    • Ludmil B. Alexandrov
    • Jaegil Kim
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 94-101
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • A critical milestone for the advancement of nanoscale organic circuitry is the fabrication of well-defined conjugated polymers on non-metal substrates. Here, the authors demonstrate extended polycyclic aromatic chains from repetitive cycloadditions which form not only on metals, but also on boron nitride layers and in the solid state.

    • Alexander Riss
    • Marcus Richter
    • Willi Auwärter
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-8
  • Whole-genome sequencing, transcriptome-wide association and fine-mapping analyses in over 7,000 individuals with critical COVID-19 are used to identify 16 independent variants that are associated with severe illness in COVID-19.

    • Athanasios Kousathanas
    • Erola Pairo-Castineira
    • J. Kenneth Baillie
    ResearchOpen Access
    Nature
    Volume: 607, P: 97-103
  • An advanced proteomics workflow is used to identify 340,000 proteins from 100 taxonomically diverse species, providing a comparative view of proteomes across the evolutionary range.

    • Johannes B. Müller
    • Philipp E. Geyer
    • Matthias Mann
    Research
    Nature
    Volume: 582, P: 592-596
  • Helicobacter pylori, a bacterial pathogen that infects human stomachs, has high genetic diversity across hosts. Here, Ailloud et al. reveal genetic structuring of H. pylori populations among different stomach regions of individual hosts and find signals of genetic associations with stomach region.

    • Florent Ailloud
    • Xavier Didelot
    • Sebastian Suerbaum
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-13