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Showing 1–24 of 24 results
Advanced filters: Author: Shu-Bing Qian Clear advanced filters
  • Under stress, such as heat shock, the N6-methyladenosine (m6A) modification is shown to accumulate primarily in the 5′ untranslated region of induced mRNAs owing to the translocation of an m6A interacting protein, YTHDF2, into the nucleus, resulting in increased cap-independent translation of these mRNAs, indicating one possible mechanism by which stress-responsive genes can be preferentially expressed.

    • Jun Zhou
    • Ji Wan
    • Shu-Bing Qian
    Research
    Nature
    Volume: 526, P: 591-594
  • CHIP — a co-chaperone/ubiquitin ligase — not only targets chaperone substrates for degradation, but mediates Hsp70 turnover after misfolded substrates have been depleted. The sequential catalysis of the CHIP-associated chaperone adaptor and its bound substrate provides a mechanism for maintaining homeostasis by tuning chaperone levels appropriately to reflect the status of protein folding within the cytoplasm.

    • Shu-Bing Qian
    • Holly McDonough
    • Cam Patterson
    Research
    Nature
    Volume: 440, P: 551-555
  • Translation elongation entails a one-codon movement of the mRNA–tRNA complex along the mRNA and is catalyzed by the forward translocase EF-G. The structurally related back-translocase EF4 catalyzes movement in the opposite direction when the ribosome stalls, but its physiological role in mammals had been unknown. Genetic ablation of EF4 in mice is now found to cause testis-specific mitochondrial deficiency and impaired spermatogenesis.

    • Shu-Bing Qian
    News & Views
    Nature Structural & Molecular Biology
    Volume: 23, P: 362-363
  • Nutrient stress induces ATF4 expression via translation reinitiation, which involves eIF3 retainment on the elongating ribosome. This translational reprogramming is mediated by stress-induced removal of the O-GlcNAc modification from eIF3a.

    • Xin Erica Shu
    • Yuanhui Mao
    • Shu-Bing Qian
    Research
    Nature Chemical Biology
    Volume: 18, P: 134-141
  • Several functions have been proposed for m6A in RNA metabolism, yet little is known regarding the specific functions of individual m6A readers. Here, the authors observe that the m6A reader YTHDC2 — which contains an RNA helicase domain — acts on the coding region to promotes mRNA translation by resolving secondary structures.

    • Yuanhui Mao
    • Leiming Dong
    • Shu-Bing Qian
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-11
  • Fusion of Cas9 with m6A writers METTL3 and METTL14 or eraser ALKBH5 enables site-specific writing or erasing of RNA m6A modifications in mammalian cells and investigation of individual m6A modification-mediated function.

    • Xiao-Min Liu
    • Jun Zhou
    • Shu-Bing Qian
    Research
    Nature Chemical Biology
    Volume: 15, P: 865-871
  • O-GlcNAcylation of translation initiation factor component eIF4GI blocks interactions to poly(A)-binding protein Pab1 to induce disassembly of stress granules, releasing Hsp70-induced mRNAs and leading to translation of protective proteins

    • Xingqian Zhang
    • Xin Erica Shu
    • Shu-Bing Qian
    Research
    Nature Chemical Biology
    Volume: 14, P: 909-916
  • Start codon selection is commonly thought to occur through the unidirectional scanning of the mRNA by the 40 S ribosome. Here the authors provide evidence that the pre-initiation complex can backslide on the mRNA to initiate translation at upstream AUG codons.

    • Yifei Gu
    • Yuanhui Mao
    • Shu-Bing Qian
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-12
  • Mao et al. reported ribosomal frameshifting events shortly after start codon selection, which is influenced by the sequence context and controlled by initiation factor eIF5B. This translational ‘noise’ is increased in response to nutrient starvation.

    • Yuanhui Mao
    • Longfei Jia
    • Shu-Bing Qian
    Research
    Nature Structural & Molecular Biology
    Volume: 30, P: 1816-1825
  • Glutathione peroxidase 4 (GPX4) inhibits ferroptosis, but protein synthesis is inefficient and costly. Here, the authors reveal that cystine uptake promotes GPX4 synthesis by activating mTORC1 and show that cancer cells are sensitized to ferroptosis by mTORC1 inhibition.

    • Yilei Zhang
    • Robert V. Swanda
    • Boyi Gan
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-14
  • QTI-seq (quantitative translation initiation sequencing) maps the position of the start codon and thus allows the determination of initiation efficiency in response to various stimuli, such as starvation, in cell culture and in vivo.

    • Xiangwei Gao
    • Ji Wan
    • Shu-Bing Qian
    Research
    Nature Methods
    Volume: 12, P: 147-153
  • Massively parallel reporter assays from a synthetic mRNA library identify sequence features of 5′ UTRs that control mRNA translatability and reveal ribosome-dependent and ribosome-independent mRNA-surveillance pathways.

    • Longfei Jia
    • Yuanhui Mao
    • Shu-Bing Qian
    Research
    Nature Structural & Molecular Biology
    Volume: 27, P: 814-821
  • The bacterial pathogen Legionella pneumophila uses effectors — toxins — to facilitate pathogenesis within host cells. A recent study identifies dual mechanisms of the effector SidI as an inhibitor of translation elongation. The N-terminal domain mimics tRNA, whereas the C-terminal domain glycosylates the ribosome.

    • Saori Uematsu
    • Shu-Bing Qian
    News & Views
    Nature Cell Biology
    Volume: 25, P: 1562-1563
  • The ribosome decodes messenger RNAs and constructs proteins based on the genetic blueprint. Ribosomes also associate with non-coding RNAs, such as PIWI-interacting RNA (piRNA) precursors, during the meiotic pachytene stage. Intriguingly, the ribosome mediates pachytene piRNA biogenesis by guiding endonucleolytic cleavage of piRNA precursors.

    • Yuanhui Mao
    • Shu-Bing Qian
    News & Views
    Nature Cell Biology
    Volume: 22, P: 141-142
  • A growing body of evidence suggests that cotranslational folding occurs from bacteria to mammalian cells, in particular for multi-domain proteins. In the assembly of yeast proteasomes, the initial interaction of Rpt1 and Rpt2 subunits has been found to take place on the translating ribosomes, coordinated by elongation pausing and involving the formation of Not1-containing compartments.

    • Xiao-Min Liu
    • Shu-Bing Qian
    News & Views
    Nature Structural & Molecular Biology
    Volume: 26, P: 89-91