This protocol describes the FTMap family of web servers for determining and characterizing ligand-binding hot spots of macromolecules, including FTSite for predicting ligand-binding sites, FTFlex for accounting for side chain flexibility, FTMap/param for parameterizing additional probes, and FTDyn for mapping ensembles of protein structures.
- Dima Kozakov
- Laurie E Grove
- Sandor Vajda